3D Structure for uvig_243384_CDS_0078 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 80.43 ;
Download
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_243384_CDS_0078 1 AcrIE6 0.70 View Alignment uvig_243384_CDS_0078 M T M T R Y E I E R E L D S L Y -K -D -L -E -I A H N S D E Q T V C R V F ----N T D S K R E A I Q V I T D E I D (60)
M+ +E + + + + +I +
AcrIE6 M N N D T E V L E Q Q ---I -K -A -F -E -L -L A D E L K D R L P T L E I L S P M Y T A V M V T Y D L I G K Q L A
uvig_243384_CDS_0078 N Y E S A L E E F D -Q P ---A -N D D D G -M -D Y -D A L C S V Q G L A R Y A (102)
+ L E S+ +
AcrIE6 S R R A E L I E I L E E Q Y P G -H -----A -A -D L ----S I K N -L -C P
uvig_243384_CDS_0078 2 AcrIF2-IC2 0.64 View Alignment uvig_243384_CDS_0078 M -T M T R Y E I E R E L D -S -L Y K D L E I A H N ------S ---D E --Q -T V -C R -V F --N T D -S K R (60)
M T T KD +A +
AcrIF2-IC2 M A T K T A Q M ---I -A Q -Q -H K D T V A A C E A A E A I A I A K D Q V W D G E G -Y -T K Y T F D D N S V L I -
uvig_243384_CDS_0078 ---E A I Q -V I -T -D E I D N Y E S A L E E F D Q P A N D D D G M D Y D A L C S V Q -G L A -R Y A (113)
D++D+ ++ D A + + + +
AcrIF2-IC2 Q S G T T Q Y A M -D -A D D A D S I K G Y A D W L D D E A R ---S A E A S E I E R L L E -S V E E -E
uvig_243384_CDS_0078 3 AcrIE1 0.60 View Alignment uvig_243384_CDS_0078 M T -M ---T R Y E I E -------------R -E -L -D -S ----L Y K D L E I A H N -S -D E Q T V C R V (60)
M + + +E + +
AcrIE1 M E K K L S D A Q V A L V A A W R K Y P D L R E S L E E -A -A -S -I L S L I V F Q A E T L S -D -Q A N -E L A N Y
uvig_243384_CDS_0078 F N T D S K -R E A I Q V I T D E I D N Y E S A L E E F D Q P A N D D D G M D Y D A L C S V Q G L A R -Y -A (115)
E + + ID E +N Y ++
AcrIE1 I R R Q G -L -E E A E G A C R N I D I M R A K W V E V C G E V N Q H G I R V Y G D ------A I D R D V D
uvig_243384_CDS_0078 4 AcrIF2 0.59 View Alignment uvig_243384_CDS_0078 M -T -M T R Y E I E R E L D ---S ---L -Y K ------D L E I -A H -N -S D E Q T V C R V F N T D S K R E A (60)
M + + + D + +
AcrIF2 M I A Q Q -H K D T V A A C E A A E A I A I -A K D Q V W D G E G -Y T K Y -T -F D D N S V L I Q S --G ----T T
uvig_243384_CDS_0078 -I -Q -V I T -D E I D N Y E S A L E E F D Q P A N D D D G M D Y D A L C S V Q G L A R Y A (107)
D++D+ ++ D A + + + +
AcrIF2 Q -Y -A M D -A D D A D S I K G Y A D W L D D E A R ---S A E A S E I E R L L E S V E E E
uvig_243384_CDS_0078 5 AcrIF23 0.57 View Alignment uvig_243384_CDS_0078 M T M T R Y E I E -R E L D S ---L Y K ------D L E I -------A H N -----------S ----D E Q (60)
MT
AcrIF23 M T N F Q T W -L D S A D -I P V Q Q N G Q W I D L E T G I -A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K
uvig_243384_CDS_0078 T V -C -R -V F -N T ---D S K R E A I -Q -V I -T D E I D ---N Y E S A L E E F D --------Q -P A N D (120)
T +E + + + + + +
AcrIF23 T F G G R -A --L --T G T A R Q K E W A E -K I -R A E K V Q Q M N Q D Q A E M A C D P S G L L T A A K -F W I E N
uvig_243384_CDS_0078 D D G --------M ---------------------D Y D A L C -S -V -Q G L A R -Y -A (173)
+ + L
AcrIF23 R N -D S A Q E I A G F V M Q Q K A L L A Q H R S A K A A G Q A D K V A K I A A -E -Y N A L T A R W G F
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;