3D Structure for uvig_239735_CDS_0042 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 83.31 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_239735_CDS_0042 1 AcrIE6 0.76 View Alignment uvig_239735_CDS_0042 M G -I I -N Q I A E ---Y T R L C R E L S E L P ----R N A E ----S E E A Y A P I E Q R R Q E L L A Q I K K M (60)
M L EL + Y I A +
AcrIE6 M N N D T E V L E Q Q I K A F E L L A D E L K D R L P T L E I L S P M Y T A V M V T Y D L I G K Q L A S R R A E L I E I
uvig_239735_CDS_0042 R -V E -L ---K M N -E --E -K P (80)
P
AcrIE6 L E E -Q Y P G H A A D L S I K N L C P
uvig_239735_CDS_0042 2 AcrIIC4 0.57 View Alignment uvig_239735_CDS_0042 M G --I ---I -N -Q I A ---E --------Y T R ------------L -C -R -E -L -S E -L P ---(60)
M + S +
AcrIIC4 M K I T S S N F -A -T I A -T S E -N F A K L S V L P K -N H R E P I K G L F K S -A -V -E -Q -F S -S A R D F F
uvig_239735_CDS_0042 R N A -E S E E A Y -A -P I E Q R R Q E L L A Q I K K M R V E L K M N -E -E -K P (103)
+N S E+ +E++ + K +
AcrIIC4 K N E N Y S K E L A E -K F N K E A V N E A V E K L Q K A I D L A E K -Q -G I Q -F
uvig_239735_CDS_0042 3 AcrIF23 0.56 View Alignment uvig_239735_CDS_0042 M -G I I N Q I A ---E Y T -R L C R -E -----L S E ------L P R ------------N A -------(60)
M + + +
AcrIF23 M T N F Q T W L D S A D I P V Q -Q N G Q W I D L E T G I A Y D P S Y N Y --A A N T R R A S L S P R G I D A R A V A K
uvig_239735_CDS_0042 -----E ----------S E -E A Y A P I E Q R R Q E L L A Q I K K M R V E ----L -K M -N ------E - (120)
+ A Q + A K
AcrIF23 T F G G R A L T G T A R Q K E W A -E K I R A E K V Q Q M N Q D Q A E M A C D P S G L L T A -A K F W I E N R N D S A Q
uvig_239735_CDS_0042 --------------------E --------------------K -P (164)
AcrIF23 E I A G F V M Q Q K A L L A Q H R S A K A A G Q A D K V A K I A A E Y N A L T A R W G F
uvig_239735_CDS_0042 4 AcrIE1 0.53 View Alignment uvig_239735_CDS_0042 M -G ----I -I -N Q I -A ---E --------Y T R -----------L C R E -------L S E L P R N (60)
M + + A L R
AcrIE1 M E K K L S D A Q -V -A L V A A W R -K Y P D L R E S L E -E A A S I L S L I V F Q A E T L S D Q A N E L A N Y I R R
uvig_239735_CDS_0042 A E S E E A Y A P I E Q R R Q E L L A Q I K K M R V E ---L ----K -M -N -E -E -K P (107)
E + A E
AcrIE1 -Q G L E E A E G A C R N I D I M R A K W V E V C G E V N Q H G I R V Y G -D -A I D R D V D
uvig_239735_CDS_0042 5 AcrIIA28 0.53 View Alignment uvig_239735_CDS_0042 M G -------I I -N Q I A E --------Y -T -R L -C -R -E L -S E L P R ---N A E S E E A Y A P I E Q (60)
M + + S + + Y +E
AcrIIA28 M K T I F T K K Q T -E E L L N D I S I E K Q K E L F -N -S M -H -D -F R S Q H A K E A R I P G W S D K Y N K L E K
uvig_239735_CDS_0042 -R R Q E L L A Q I K K M R V E -----L K M --N --E --E -K P (96)
++ L
AcrIIA28 K M L S D F E E V T G I K Y D -T L E S E L I W D N L S N K F L Y N -S
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;