3D Structure for uvig_237829_CDS_0060 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 89.63 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_237829_CDS_0060 1 AcrIE6 0.71 View Alignment uvig_237829_CDS_0060 M T M L K S A Y I I D A E E L Q K -K I L S E -I D S V K H C Y C K W K E P G S E D A D F Y Y M L F K E H Y G V L R -M (60)
M+ D E L + + L
AcrIE6 M N -------N D T E V L E -Q Q -I K A F E -L L A D E L K D R L --------------P T ----L E I -
uvig_237829_CDS_0060 L L A I Q G N S D S E V A T I L N Y M K D L A C R -E -S -I -R -D -Q I -N -Y -L -D -D -E -I -E -D -L G T (120)
+ + + L
AcrIE6 ---L ----S P M Y T A V M V T -----Y -D -L -I -G -K -Q -L A -S -R -R -A -E -L -I -E -I L E E
uvig_237829_CDS_0060 K M Y E I I R N F K V E D D G E S E K P R Y Y -A V K A Q R D E L I N R R N V L I -H K I A K (167)
+ +
AcrIE6 Q Y P G H A -----------------A -D L --------S I ----K N -L C P
uvig_237829_CDS_0060 2 AcrIE1 0.65 View Alignment uvig_237829_CDS_0060 M T M L K S A Y I I D A E E L Q K K I L S E I D S V K H C Y C K W K E P G S E D A -D F -Y Y -M L F K E H Y G V L R M (60)
M +Q ++ E +L
AcrIE1 M E K --K -L S D ----A Q V A L V A A W R K --------Y -------P -D L -R E -S L E E A A S I L S L
uvig_237829_CDS_0060 L L A I Q G N S D S E V A T I L N Y M K D L A C R E S I R D Q I N Y L D D E I E D L G T K M Y E I I R N F K V E D D G E (120)
++ + + ++NY + E + +D E+
AcrIE1 I V F Q A E T L S D Q A N E L A N Y I R R Q -G L E E A E G A C R N I D I M R A K W V E V C G E V N Q H G I ------
uvig_237829_CDS_0060 S E K P R Y -Y -A V K A Q R D E L I N R R N V L I H K I A K (151)
Y ++ + +
AcrIE1 ---R V Y G -D --------------A I D R D V -D
uvig_237829_CDS_0060 3 AcrIIC4 0.59 View Alignment uvig_237829_CDS_0060 M T M L K S A Y I I D A E E L Q K K I L S E I D S V -K H C Y C K W K E P G S E D A D F Y Y M L F K E -H Y G V L R M L (60)
M S + E L
AcrIIC4 M K I -T S ------S N F A -T -------I A --------T -------------S E N -F A K L S V -
uvig_237829_CDS_0060 L A I Q G N S D S E V A T I L N Y M K D L A C R E S I R D Q I N Y L D D E I E -D L G T K M Y E I I R N F K V E D -D G (120)
+ I + + + + +
AcrIIC4 -----L P K N H R E P I K G ---------L F K S ----A V E Q F S S -A R D F F K N -E N Y --S K E L A E
uvig_237829_CDS_0060 E -S E K P R Y -Y A V K A Q R -D E L I N -R R N V L I H K I A -K (155)
AV + ++ ++ + +
AcrIIC4 -K ---F N -K E A V N E A -V E K -L Q K A I D L A E K Q G I Q F
uvig_237829_CDS_0060 4 AcrIF23 0.58 View Alignment uvig_237829_CDS_0060 M T M L ---K -S A Y -I ----------------I D A E E L Q -K -----K I --L S E I D S V K H C Y C (60)
MT SA ++ V +
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T F G
uvig_237829_CDS_0060 K -W K E P G -S E D A D F Y Y M L F K E H Y G V L R M L L A I Q -G -N S D -S -E V A T I L N Y M K D L A C R E S I (120)
G ++ + E+ A +T++ +
AcrIF23 G R A L -T G T A R Q K E W A E K I R A E K V Q Q M N Q D Q A E M A -C D P -S -G L -L T A A K F W I E N -R ----
uvig_237829_CDS_0060 R D Q I N Y L D D E I E D L G T K M Y E I -I -R -N F -K V E D D G E S E K P R Y Y A V -K A Q R D E L I N R R N V L (180)
D+++ + + ++ N+L
AcrIF23 N D S A Q E I A G F V M Q Q K A L L A -Q H -R -S -A K A -A -G ----------Q A -D K V A K I A A E Y N A L
uvig_237829_CDS_0060 I H K I A K (186)
+
AcrIF23 T A R W G F
uvig_237829_CDS_0060 5 AcrIF3 0.54 View Alignment uvig_237829_CDS_0060 M T M L K S A Y I I D A E E L Q K K I L S E I D S V K H C Y C K W K E P G S ---E -D A D F Y Y M L F K E H Y G V -L (60)
M+ S I + + + E+ +P + +
AcrIF3 M S ---S --T I S D R I I -S R S V I E A A R F I Q S W E D A -D P D N L T E -S Q V L A A S S F A A R L H E G L Q
uvig_237829_CDS_0060 R M L L A I Q G -N -S D ---S E V A T I L N Y M K D L A C R --E S I R D Q I N Y L D -D -E I -E -D -L G T K M (120)
+L + E + R +
AcrIF3 A T V L Q R L V D E S N R D E Y R E F Q A W E E A L L N A D G R V T ---S N P F A D W -G -W W -Y -R -I A N V M L
uvig_237829_CDS_0060 Y E I I R N -F K V -E D D G E S E K P R Y Y A V -K -A Q -R D E L I N R R N V L I H K I A K (168)
+ V R +
AcrIF3 A T A S Q -N V G -V ----A W G S ----H V H -G -R L M A I F Q D R F Q Q H Y E D E E C
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;