3D Structure for uvig_22918_CDS_0021 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 87.51 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_22918_CDS_0021 1 AcrIE1 0.72 View Alignment uvig_22918_CDS_0021 M N -K -P D Y R D Y L E -Y D E D E C ---D -D R I T E ---E Y Y I -T -L K K Y C D -E L E H -K Y -N K L -L (60)
M K D L + + N
AcrIE1 M E K K L S D A Q V A L V A A W R K Y P D L R E S L E E A A S I L S L I V F -Q -A E T L S D -Q A N E L -A N Y -I R
uvig_22918_CDS_0021 D N I H D Y R H -E N -H -C M -K -L T I R N L C N H F G V K S E -E -E L -K -Q I -Y -L K K E G -R -N (116)
+ + +
AcrIE1 R Q G L E E A E G -A C -R -N I -D I M R A -K W V E V C G E V -N -Q -H G -I R -V -Y G D A I D R D V D
uvig_22918_CDS_0021 2 AcrIE6 0.60 View Alignment uvig_22918_CDS_0021 M N K P D Y R -D Y L E Y D E D E C D D R I -T E E Y Y I T L K K Y C D -E L E H -K Y ---N K L L D -N I H D Y -R (60)
M LE L +
AcrIE6 M -N N -D T E V -L E -----Q ----Q -I K A F E L L A D E L K D R -L P T -L E I L S P M Y T A V M V T -Y -
uvig_22918_CDS_0021 -H -E -N H C M -K L T I R N L C N H F G V K S E E E L K Q I Y L K K E G R N (100)
+ L + + +K
AcrIE6 D -L -I G K Q -L A S R R A E L I E I L E E Q Y P G H A A D L S I K N L C -P
uvig_22918_CDS_0021 3 AcrIC3 0.57 View Alignment uvig_22918_CDS_0021 M N K -P --------D ----Y R D Y L E -------Y D E -D E C -----D D R I T E -E Y Y I T L K K Y C (60)
M+ + +
AcrIC3 M S I Q V T S T N G R T V N L E I E L G S V V -A S S G Q V K F M A D K -T D R G L E S R F L V P E A G N R ------
uvig_22918_CDS_0021 D E L E H --K Y N -K L L -D -N I -H -D -Y -R -H -E -N -H -C -M -K -L T -I R N L C N H F G V K S E E E (120)
+E L + + E
AcrIC3 -R I E -V A L T G R -D L E -A -A N -A -L -F -S -E -L -A -A -S -V -E -A T -N E M Y R E ----L D A E
uvig_22918_CDS_0021 L K Q I Y -L K K E G R N (133)
Q K
AcrIC3 R A Q -I N -K A L E -G
uvig_22918_CDS_0021 4 AcrIIA11 0.57 View Alignment uvig_22918_CDS_0021 M N K P D Y R ---D -Y L E ------Y D E -D ----E -C ------D D R I T ----E -E Y Y I T L -K K -(60)
M R + Y D DD++ K
AcrIIA11 M A D M T L R Q F C E R Y R -K G D F L A K D R E T Q I E A -G -W Y D W F C D D K A L A G R L -A K I W G I -L K G I
uvig_22918_CDS_0021 ----Y C -D E L -E H K Y N K L L D N I H D Y R H E N -H C M K L T I R N L C N ----------H -----F - (120)
D + +
AcrIIA11 T S D Y I -L D N -Y R V W F K N N C P M V G P L Y D D -V -R F E P L D E E Q R D E L Y F G V A I D D -K R R E K -K
uvig_22918_CDS_0021 ---G -V ----------K ------------------------S E E E -----L -K Q I -Y --- (180)
+ E
AcrIIA11 Y V I F T A R N D Y E N E C G F -N N V R E V R Q F I N G W E D E L K N E E F Y K A R E -K K R Q E -M E E -A -N N K
uvig_22918_CDS_0021 ------------L -K -K E G R N (201)
AcrIIA11 F A E I M Q R A D E I L -W -N -L K E D
uvig_22918_CDS_0021 5 AcrIF23 0.56 View Alignment uvig_22918_CDS_0021 M N K -P -D Y R --D Y L E --------Y D -E D E C ----------------D D R -----------(60)
M+ D +
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T F G
uvig_22918_CDS_0021 ------------------------I T ---E E -Y Y I -T L K K Y C D -E L E H -K Y N K L L D -N I H (120)
+ + ++
AcrIF23 G R A L T G T A R Q K E W A E K I R A E K V Q Q -M N Q D Q A E -M A C D -P S G L L T A -A K F W I E N R -N D S A Q
uvig_22918_CDS_0021 D -Y -R -H -E -N H -C -M K L -T I R -N L C N -H F ---G V -K -S E E E L K Q I Y L K K E G -R -N (176)
+ + Y
AcrIF23 -E -I -A -G -F -V M -Q -Q K A L -L A Q H -R S A K A A G Q -A -D K V A K I A A E Y N A L T A R W G F
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;