3D Structure for uvig_228630_CDS_0037 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 82.41 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_228630_CDS_0037 1 AcrIE6 0.67 View Alignment uvig_228630_CDS_0037 M N A V ---N V E D L L D L I E S M K H V S A D E I I A A S K E N N E L E R I -A H I ----A T E A T Y N A V I K K (60)
M +E + + E D + + + + +
AcrIE6 M -N N D T E V L E Q Q I K A F E L L A D E L K D R L P -T L E I L S P M Y T -A V M -V T Y D L I G K Q L A S R R A E
uvig_228630_CDS_0037 L E S L R ----V Y A V I V L D N --K -E (83)
L + ++ L
AcrIE6 L I E I L E E Q Y P G H A A D L S I K N L C P
uvig_228630_CDS_0037 2 AcrIIC4 0.61 View Alignment uvig_228630_CDS_0037 M N A V -------N -V E -D -L -------L ----D L I E S M K H -V -S A -D -E -I I A A S K -E ---(60)
M + + I +
AcrIIC4 M K I T S S N F A T I A T S -E -N -F A K L S V L P K N H R E P I K G L F -K -S A -V -E -Q -F S S A R D F F K N
uvig_228630_CDS_0037 N N -E L E -R I A H I A T E A T Y N A V I K K L E S L R V Y A V I V L -D N --K E (103)
+A + N ++ KL + + +
AcrIIC4 E -N Y -S K E L A E K F N K E A V N E A V E K L Q K A I D L ----A E K Q G I Q F
uvig_228630_CDS_0037 3 AcrIE1 0.60 View Alignment uvig_228630_CDS_0037 M N --A -V ----N V E ----------D -L -L ----D L I E S M -K H ----V S A D E I I A -A S K E -(60)
M + + + ++ D + +
AcrIE1 M E K K L S -D A Q V A L V A A W R K Y P D L R E S -L -E E A A S I L S L -I V -F Q A E T L S D Q A -N E L -A N Y
uvig_228630_CDS_0037 N N -E L E R I A H ----I -A -T E A -T -Y -N -A V -I K K L E S L R V Y A V I V L D -N ---K -E (115)
+ + + + V +
AcrIE1 I R R -Q G L E E A E G A C -R -N I D -I -M -R -A K -W V E V C G E V N Q H G I R V Y G D A I D R D V D
uvig_228630_CDS_0037 4 AcrIF25 0.54 View Alignment uvig_228630_CDS_0037 M N --A V ----------N V E D L L -------------------D -L -I E S M K H -V -S A ----(60)
M ++ +E +
AcrIF25 M D N D D -K K P D A L I H L R V P A E V K G R W V K E S R L E G M K L T D W I T -G -R V E A K A -L -S -I A E V L
uvig_228630_CDS_0037 D -E -I I -A -A S K E -N N E L E ---------R -I -A H ------------I --------A ----(120)
+ + + +
AcrIF25 -E -E A -A -A M A R -S L E D S -P I F Y R N K L C -A -D G -I V T I Q Q Q A A R F S A A T D D A T R L D A A L W
uvig_228630_CDS_0037 T -E A T Y ---N ----------------------A -V -I -K -K L E S L R -V ----Y A V -I -V -(180)
Y +
AcrIF25 -A R E G Y Q L L S S G L P D S Y S G A V P N E G R T G W V T A S Q -M -A -R L F G G E -A -L W I E R C Q Q -E -L
uvig_228630_CDS_0037 L D -N --K -E (189)
AcrIF25 G G A G K E D G R
uvig_228630_CDS_0037 5 AcrIC3 0.53 View Alignment uvig_228630_CDS_0037 M N A V -------------N V E D L L D L I E ---S M K H ----------V ---------S A -D -E (60)
M++ + ++ M
AcrIC3 M S I Q V T S T N G R T V N L E I E L G S V V A S S G Q V K F M A -D K T D R G L E S R F L V P E A G N R R I -E V A L
uvig_228630_CDS_0037 I I A A S K E N N E L E R I A H -I -A -T -E -A T Y N A V I K K L E S L R V Y A V I V -L D N -K E (112)
N L + N + L+ R+ +
AcrIC3 T G R D L E A A N A L F S E L -A -A -S -V -E -A T N E M Y R E L D A E R A Q ---I N -K A L E G
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;