3D Structure for uvig_228426_CDS_0038 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 85.82 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_228426_CDS_0038 1 AcrIE6 0.70 View Alignment uvig_228426_CDS_0038 M E K D K F E K A I E L N K E I E E L K S H K I A L E N S M I R Y G G G L I -F T Y -N S M -H -N -D V S L K K E L Y (60)
M E + K E L +
AcrIE6 M N -N D T E V L E Q Q I K A F E L L A D E L K D R L P T L E I L S P M -Y T -A V M -V T Y -D -L I G K Q L A ---
uvig_228426_CDS_0038 G G N D F F E N Y M N A L D S -K -I -D -A L L -K Q F D E L (92)
L K+
AcrIE6 S R R A E L I E I L E E Q Y P G -H -A -A D L S I K N L -C P
uvig_228426_CDS_0038 2 AcrIE1 0.64 View Alignment uvig_228426_CDS_0038 M E K D ------K F E -------K -A I -E -L -N -K E ----I E E L K S H K I A L E N S M I R Y G G G L I (60)
MEK + + L + +
AcrIE1 M E K K L S D A Q V A L V A A W R K Y P D L -R E -S -L -E E -A A S I L S L I V F Q A E T L S D Q A N E L A N Y I R
uvig_228426_CDS_0038 F T Y N S M H N D V S L K K E L Y ----G G N D F F E N Y M N A L D -S K I D A L L -K Q F D E --L (112)
+ + + + + ++ + D
AcrIE1 ---R ---Q G L E E A E G A C R N I D I M R A K W V E V C G E V -N Q H G I R V Y G D A I D R D V D
uvig_228426_CDS_0038 3 AcrIF23 0.58 View Alignment uvig_228426_CDS_0038 M -E K -D K F E ---K -A I E ------------------------------L N -----------(60)
M + +
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T F G
uvig_228426_CDS_0038 -------K -E -------I -E E L K S H K -I A L E N S M I R Y G G G L I F T Y N S M H -N ---D V S L K K (120)
I E + M+ GL+ N ++
AcrIF23 G R A L T G T A R -Q K E W A E K I R A E K V Q Q -M N Q D Q A E M A C D P S G L L T A A K F W I E N R N D S A Q E I A
uvig_228426_CDS_0038 E L Y G G N D F F E --------N Y M N A -L -D -S -K -I -D -A -L -L K -Q F D -E --L (171)
+
AcrIF23 G F V M Q Q K A L L A Q H R S A K A A G Q A D K -V -A -K -I -A -A -E -Y -N A -L T A R W G F
uvig_228426_CDS_0038 4 AcrIF25 0.57 View Alignment uvig_228426_CDS_0038 M E K -D --K F E ---------K -A -I -E --------L ------------N K E --------I E (60)
M+ D +E
AcrIF25 M D N D D K K P D A L I H L R V P A E -V -K -G -R W V K E S R L E G M K L T D W I T G R V E A -K A L S I A E V L E
uvig_228426_CDS_0038 E L K S H K I A L E -N S M I R ----Y G -G -G -L -I F ---T Y -N S ----M -H N ------D V S ----(120)
E+ L S I + +
AcrIF25 E A A A M A R S L -E D S P I F Y R N K L C A -D -G -I -V T I Q Q Q A -A R F S A -A T D D A T R L D A A -L W A R
uvig_228426_CDS_0038 -L -K K E L Y ----------------------G -G N -D -F -F E -N Y M N A L D -S -K I D -A -L L (180)
L F + L
AcrIF25 E -G Y Q L L S S G L P D S Y S G A V P N E G R T G W V T A S Q M -A -R -L F -G G E A L W I -E -R C Q -Q -E L G
uvig_228426_CDS_0038 K Q F D E --L (188)
E
AcrIF25 G A G K E D G R
uvig_228426_CDS_0038 5 AcrIIC4 0.55 View Alignment uvig_228426_CDS_0038 M E -K -D -K F E K A I E ---L N K E ----I E E L K S H K I A L E N S M I R Y G G G -L I F T Y -N S M -H N D (60)
M F ++ + L S + F +
AcrIIC4 M K I T S -S N F A T I A T S E N -F A K L S V L P K N H R E P I K G L F K S A V E Q F S S A R D F F -K -N E N -Y S
uvig_228426_CDS_0038 V S L K K E L Y G G N -D F F E N Y M N A L D S K I D A L L K Q F D E L (96)
L N + L ID++ KQ
AcrIIC4 K E L A E K --F -N K E A V N E A V E K L Q K A I D L A E K Q G I Q F
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;