3D Structure for uvig_227852_CDS_0042 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 95.12 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_227852_CDS_0042 1 AcrIIA7 0.77 View Alignment uvig_227852_CDS_0042 M S L S F G E A L E E M G I G C K V A R N G W N G K G M F L F M -I A G G A W D F E ----C -D -I ---------(60)
M+ FG ALE G VAR GWNGKGM +
AcrIIA7 M T --F G Q A L E S L K R G H L V A R K G W N G K G M -F I F M R P E D S -L P T N M I V -N -Q V K S L P E S F K R
uvig_227852_CDS_0042 --D -G ---V --D -G -L N T L P F I C M K T A D G K L V -P W L A S Q T D M I A S D W M V I G (111)
+ + +CMK ADG +V WLASQTDM+A+DW ++
AcrIIA7 W V -A N N H G -D S E T D R I K F T A Y L C M K A A D G T I V N G W L A S Q T D M L A N D W V I V E
uvig_227852_CDS_0042 2 AcrVIA3 0.55 View Alignment uvig_227852_CDS_0042 M S L S F G E A L E E M G I G C K V A R N G W N G K G M F L -F -M I A G G A W -D F E -C D I D --G V D -G L N T L (60)
M F E G + + G + + +T+
AcrVIA3 M F K E F L E K C L R Y G N L Y I L E E -T -G D R K K V K R -I S K R H G K V T E -A S V -L L F D S -G T K R T T I
uvig_227852_CDS_0042 P F I C M K T A D G K L V P W L A S Q T D M I -A S D W -M V I G (93)
I + G + +
AcrVIA3 N E I -Y L N S Q G Y F I I R -D Q -K R L K L -E --K --F K
uvig_227852_CDS_0042 3 AcrIF18 0.54 View Alignment uvig_227852_CDS_0042 M S L S F G E A L E E -M G I G C K V A R N G W -N G K G M -F L F M I -A G G A W D F E C D I D G V D G L N T L P F I (60)
M+ + + + N + G + + + +
AcrIF18 M T -T I ----K A A -Y ----I S K D Q N W N D G T T T -Y W F D V N G E T F G V -V H -G -G E ---S W N -A
uvig_227852_CDS_0042 C M K T A D G K L V P -W L A -S Q T D M I A S D W M V I -G (91)
DG Q I ++ M I
AcrIF18 K V V D C D G A P S D Q -Y T V D Q F N -I -T E D M -I A E
uvig_227852_CDS_0042 4 AcrIIA4 0.52 View Alignment uvig_227852_CDS_0042 M S L S F G E A L E E M G I -G C K V A R N G W N --G K G -M -F L F M -I -A G G A W D F E C D I D G V D G L N T L (60)
M +++ E V +G + G + + + +
AcrIIA4 M -N -I N D L I R E I K N K D Y T V K L S G T D S N S I T Q -L -I I R V -N N D G N E Y V I S E -S E N E --S I V
uvig_227852_CDS_0042 P F I C M K T -A -D G K L V P W L A S Q T D M I A S D ----W M -V -I G (99)
+ +
AcrIIA4 E K F I S -A F -K -N G W N Q E Y E D E E E F Y N D M Q T I T L K S -E L N
uvig_227852_CDS_0042 5 AcrIIA22 0.49 View Alignment uvig_227852_CDS_0042 M S L -S F G E A L E E M G I G C K V A R N G W N -G K G M F L F M I A G G A W D F E C -D I D G V D G L N T -L P F I (60)
M + +++ E C + DGL +
AcrIIA22 M V V E E T R D L A -E T A -D C V -------V ----I E A I L ---------V ----D D G L R Y R Q L S V
uvig_227852_CDS_0042 C M K T A D G K L V P W L A S Q T D M I A S -D W M V I G (89)
K G ++ + +
AcrIIA22 G I K D E N G D I I R I V P -------I S -T V L -I
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;