3D Structure for uvig_220652_CDS_0017 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 86.56 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_220652_CDS_0017 1 AcrIE1 0.71 View Alignment uvig_220652_CDS_0017 M S E C ----V -R E -M ----E ----A A P -------L -------T L E -Q F -E V -L N K ------(60)
M + ++E +
AcrIE1 M E K K L S D A -Q V -A L V A A W -R K Y P D L R E S L E E A A S I L S L I V F Q A E T -L S D -Q -A N E L A N Y I
uvig_220652_CDS_0017 ------K N C M L E E E N R K L K S D I R E L Q Q V I I N M C H E R Y S H Y -R P --D (106)
+ + E+ + + Y D
AcrIE1 R R Q G L E E A E G A C R N I D I M R A K W V E V C G E V N Q H G I R V Y G D A I D R D V D
uvig_220652_CDS_0017 2 AcrIE6 0.59 View Alignment uvig_220652_CDS_0017 M S E C V R E M E A A P ----L T L E -Q F -E V -L N K -----------K N C -M -L E E -E -N R K -L K S (60)
M+ E L ++ + L + + L S
AcrIE6 M N N D T E V L E Q Q I K A F E L L A D E L -K D -R L -P T L E I L S P M Y T A V M -V -T Y D -L -I G K -Q L A S
uvig_220652_CDS_0017 D I R E L Q Q V I I N M C H E R -Y S H Y -R --P -D (88)
EL ++
AcrIE6 R R A E L I E I L E E Q Y P G -H A A D L S I K N L C P
uvig_220652_CDS_0017 3 AcrIC3 0.59 View Alignment uvig_220652_CDS_0017 M S -E C V R E ---M -E ----------A A P ----------L -----------------T L E -Q (60)
MS + +
AcrIC3 M S I Q V T S T N G R T V N L E I E L G S V V A S S -G Q V K F M A D K T D R G L E S R F L V P E A G N R R I E V A L T
uvig_220652_CDS_0017 F E V L N -K -K N C -M -L -E E -E N R -K L K S D I R E L Q Q V I I N M C H E R Y S H Y -R P D (111)
N E +
AcrIC3 G R D -L E -A A N -A -L -F -S E -L A A -S V E A T N E M Y R E L D A E R A Q I N K -A L -E G
uvig_220652_CDS_0017 4 AcrIF23 0.53 View Alignment uvig_220652_CDS_0017 M S E C V ---R E -M -E -------A A P ------------------------------------(60)
M+ +
AcrIF23 M T N F Q T W L D -S -A D I P V Q Q N G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T
uvig_220652_CDS_0017 ----L -------------------------------T L E -Q F E V L N K ------------- (120)
+ ++
AcrIF23 F G G R A L T G T A R Q K E W A E K I R A E K V Q Q M N Q D Q A E M A C D P S G L L T A A K -F W I E N R N D S A Q E I
uvig_220652_CDS_0017 -K N C M -L E E -E N R -K -L -K -S -D I R -E L Q Q V -I -I -N M C H E -R Y S H Y R -P --D (173)
M Q Y+
AcrIF23 A G F V M Q -Q K A -L L A -Q -H -R -S A K -A A G Q A D K -V -A K I A A -E -Y N A L T A R W G F
uvig_220652_CDS_0017 5 AcrIB2 0.51 View Alignment uvig_220652_CDS_0017 N /A (3)
N/A
AcrIB2 N /A
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;