3D Structure for uvig_219836_CDS_0088 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 91.90 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_219836_CDS_0088 1 AcrIE6 0.73 View Alignment uvig_219836_CDS_0088 M A D K E E I K T -L E E -L E E K G R V L R E Y K E K F R Q M C Q E ---N K M I K G S T V L K L Y D K I E E I Q R E (60)
M + + ++ E K++ + + T + + E
AcrIE6 M -N N -D T E V L E -Q Q I K A F E L L A D E L K D R L P T -L E I L S P M Y T A V M V T Y D L I G K Q L A S R R A E
uvig_219836_CDS_0088 Y E H -L -D N K L T ----L M E Y N -F -I (84)
+
AcrIE6 L I E I -L E E Q Y P G H A A D L S I K N L C P
uvig_219836_CDS_0088 2 AcrIIC4 0.61 View Alignment uvig_219836_CDS_0088 M -A D K E -E I K ----------------T L E E -L E E K G R V L R E Y K E K F R Q M C Q E N K M I K G S T (60)
M + + E + + + E R
AcrIIC4 M K I T S S N F A T I A T S E N F A K L S V L P K N H R E -P I K G L F K S A V E Q F S S A R D F F K N E N Y -S K E L
uvig_219836_CDS_0088 V L K L Y -D K I E E I Q R E Y E H L D N K L T L M E Y N -F I (92)
+ K + + E+ ++ +
AcrIIC4 A E K F N K E A V N E A V E K L Q K A I D L A E K Q G I -Q -F
uvig_219836_CDS_0088 3 AcrIE1 0.61 View Alignment uvig_219836_CDS_0088 M A --D K ----E -E -I -K ----------T L ----E -E ----L E E K G R V L R E Y K E K F R Q M C Q (60)
M +L + L + +
AcrIE1 M E K K L S D A Q V -A -L -V A A W R K Y P D L R E S L E E A A -S -I L S L I V F Q A E T L S D Q A N E L A N Y I R
uvig_219836_CDS_0088 E N K M I K G S T V L K L Y D K I -E E I Q R -E Y E H -L D -N -K -L -T L -M E Y ----N -F -I (113)
+ + + D +
AcrIE1 R Q G L E E A E G A C R N I D I M R A K W -V E V C G -E V -N -Q -H -G I -R V Y G D A I D -R D V D
uvig_219836_CDS_0088 4 AcrIIA28 0.59 View Alignment uvig_219836_CDS_0088 M A -D --K -E -E I K T L E E -L E E K G R V -L -R E Y -K E K F R -Q M C Q E -N -----K M I K G S T V L K (60)
M K L + EK + ++ R Q K
AcrIIA28 M K T I F T K K -Q T E E L L N D I S I E K Q K E L -F -N S M H D F -R S Q -H A K E A R I P G W S D K Y N K L E K K
uvig_219836_CDS_0088 L Y D K I E E I Q -R E Y E H L D N K -L T -L M E Y N -F --I (93)
EE++ Y+ L++ +
AcrIIA28 M L S D F E E V T G I K Y D T L E S E L I W D N L S N K F L Y N S
uvig_219836_CDS_0088 5 AcrIF23 0.58 View Alignment uvig_219836_CDS_0088 M -A D K ----E -----E I -----------K -----------------------T L ------(60)
M +
AcrIF23 M T N F Q T W L D -S A D I P V Q Q N G Q W I D L E T G -I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T
uvig_219836_CDS_0088 ----------------E E -----------L E -E -K -G R V L R -E Y K E -K F R -Q -M C Q E N K M (120)
E EN+
AcrIF23 F G G R A L T G T A R Q K E W A E K I R A E K V Q Q M N Q D Q A -E -M A C D P -S G L L -T A A -K -F W -I E N R N
uvig_219836_CDS_0088 I K G S T V L K L Y D K I E E I Q R ---E -Y -E -H ----L D N K L T L M E Y N ---F ---I (171)
+ ++ + K+ +
AcrIF23 D S A Q E I A G F V M Q Q K A L L A Q H R S A -K -A A G Q A D K V A K I A A E Y N A L T A -R W G F
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;