3D Structure for uvig_212889_CDS_0082 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 96.26 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_212889_CDS_0082 1 AcrIE6 0.73 View Alignment uvig_212889_CDS_0082 M T -Y L E I L G W A R K G I S A E K A N L R T M Q E K A L E G --Q ---A H D I A S H C Q E R I D A L D V R -L A T (60)
M+ E+L K + L+ + + + + +
AcrIE6 M N N D T E V L E Q Q I K A F E L L A D E L K D R L P T L E I L S P M Y T A V M V T Y D L I G K Q L A S R R A E L I E I
uvig_212889_CDS_0082 L E E L E ----D -I H -N ---R -K (81)
LEE
AcrIE6 L E E Q Y P G H A -A D L S -I K N L C P
uvig_212889_CDS_0082 2 AcrIE1 0.62 View Alignment uvig_212889_CDS_0082 M -T ----Y L E I L G ----------W ----A -R -K ----G I S ---A -E -K -A -N -L R T -M Q -(60)
M +L I +
AcrIE1 M E K K L S D A Q V A L V A A W R K Y P D L R E S L E E -A -A -S I L S L I V F Q A E T -L -S -D -Q -A N E L -A
uvig_212889_CDS_0082 E K A L E G Q A H D I A S H C Q E R I D A L D V R L A T L E -E ---L E ----D I H N -R --K (110)
+ + A ID+ ++ + + E R
AcrIE1 N Y I R R Q -G L E E A E G A C R N I D I M R A K W V E V C G E V N Q H G I R V Y G D A I D R D V D
uvig_212889_CDS_0082 3 AcrIIC4 0.60 View Alignment uvig_212889_CDS_0082 M -T Y L E I L G ------------W -------A -R K -G -I -S -A E K A N L R -T M Q E K A L E --G Q (60)
M K + + + +
AcrIIC4 M K I T S S N F A T I A T S E N F A K L S V L P K N H R E P I -K G -L -F -K S A V E Q -F S S A R D F F K N E N Y S
uvig_212889_CDS_0082 A H D I A -S -H C -Q E R I D A L D V R L A T L E E L E D I H N -R K (96)
++A E + + +L + +L +
AcrIIC4 K -E L A E -K F -N K E A V N E A V E K L Q K A I D L A E K Q G I Q F
uvig_212889_CDS_0082 4 AcrIF23 0.59 View Alignment uvig_212889_CDS_0082 M -T Y L E I L G ---------------------------------------------------(60)
M + L
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T F G
uvig_212889_CDS_0082 ---------------W A ----R -K -G I S ----A E K -A -N L R T M Q E ----K A L E -G -Q --A (120)
+ AE + +
AcrIF23 G R A L T G T A R Q K E W A E K I R A E K -V -Q Q M -N Q D Q A E M A -C D -P S G L L T A A K F W I -E -N R N D S
uvig_212889_CDS_0082 -H D I A S H C Q E R I D A L D V --------R ----L -A T L E E L E D I H N -R --K (168)
+ AL + A + + + R
AcrIF23 A -Q E I A G F V M Q Q K A L L A Q H R S A K A A G Q A D K -V A K I A A E Y N A L T A R W G F
uvig_212889_CDS_0082 5 AcrIF2-IC2 0.54 View Alignment uvig_212889_CDS_0082 M -T -Y L E I L G W A ----R -K G I -S ---A E K A --------N L R T ------------M Q E -K A (60)
M T + +
AcrIF2-IC2 M A T K T A Q M I A Q Q H K D T -V A A -C -E A A E A I -A I A K D Q V W D G -E G Y T K Y T F D D N S V L -I Q S G
uvig_212889_CDS_0082 L E --G Q ---A H D I A S H C Q E R I D A L -D -V -R L -A -T L E E L E D I H N R K (106)
D + + +D +E L +
AcrIF2-IC2 T T Q Y A M D A D D A D S I K G Y A D W L D D E A -R -S A E A -S E I E R L L E S V E E E
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;