3D Structure for uvig_205238_CDS_0021 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 91.24 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_205238_CDS_0021 1 AcrIIA27 0.71 View Alignment uvig_205238_CDS_0021 M -K Y N V Q M L ----V -------T G T V T K T V D A D S P Y K A K E I A S E K Y G D Q S I I L C S R C A -H V (60)
M N+ + ++ V+A + A A E Y +S
AcrIIA27 M K T F N I I V S E S A N L K E H S S E L V D N I I Y K V E A K N R R E A F K K A R E E Y S F S S -K ---W K -F -N
uvig_205238_CDS_0021 -V E -G -L S I -S E D P ----D -S -Y -E -V E L I -K E (93)
++ +
AcrIIA27 M R -D -L -T A I D N T H R R A W -G -R -R -Y -L R V E E A
uvig_205238_CDS_0021 2 AcrIE2 0.64 View Alignment uvig_205238_CDS_0021 M K -Y N V Q M L V T -G T V --T -K -T V D -A -D ----S P -Y K A K -E -I -A S E K Y G D Q S I I L C S R C (60)
M Y + + + VD A + E
AcrIE2 M N T Y L I D P R K N N D N S G E R F -T -V D A -V -D I T A A A K -S A A Q -Q -I L G E E F E G L V Y R E ---T
uvig_205238_CDS_0021 A H V V E G -----L S I S E -D P D S -----Y -E V E L -I K E (96)
+
AcrIE2 G E S N G S G M F Q A Y H H L H G T N R T E T T V G -Y P F H -V M E L
uvig_205238_CDS_0021 3 AcrIIA33 0.57 View Alignment uvig_205238_CDS_0021 M K Y N V Q -M L V T G T V T K T V D A D S P Y K A K E I ------A S -E -K Y G D -Q S I I L ----C S R -C A (60)
M +TV+A++ YK+ E + D L
AcrIIA33 M I K W T G K -S T D K G W I R T V E A E T Y Y K L L E T L V D K G Y I -G -D Y I -D S D -S Q L F H E L -A Y V -S
uvig_205238_CDS_0021 H V V E G L -S I ----S E -------D ---P D ------S ---------------Y E -V E L ----(120)
+V L D D
AcrIIA33 P A V A D L E D -R L N D E H Q V E Q A L E D L E N F D W N R V F E K L T D Q Q F Q T A I A G C T S Q A Y Y Q -E F E V
uvig_205238_CDS_0021 I K E (123)
E
AcrIIA33 -I E
uvig_205238_CDS_0021 4 AcrIE8 0.57 View Alignment uvig_205238_CDS_0021 M K Y N V Q M L V T G T V -T K T V D A D ----S P Y K A K E -I A S E -K -Y G D Q S I I L C S R C A H V -V E -G (60)
M + + + A G + +
AcrIE8 M T T I T I N T -Y D P E A R F N M S G E E A K E F F A F V E -E Q A K -V -S -G F D -V Y --------Y -D S -
uvig_205238_CDS_0021 L S I -S E D P D S Y E V E L I K -E (79)
+ E+ +
AcrIE8 C T Y V D E E S E R F V E K C F Q N Y
uvig_205238_CDS_0021 5 AcrIC9 0.56 View Alignment uvig_205238_CDS_0021 M -K --Y N --V Q -M L V T G T V T K T V D A D S P Y K A K E I A S E K Y G D -Q S I I L -C S R C A H -V V E G L (60)
M + + + ++ + + + I + +
AcrIC9 M E T K M T S F Y K I T -A Y N S Q A L Y F -W -G T D A D V D R Y -V D W L N R D R -E I N V -Y A A E -A -I P E A
uvig_205238_CDS_0021 S I S E D P D S Y E ---V E L -I --------K E (88)
+
AcrIC9 E W A Q Y E G R D D V L S G -E E C G W D D F M S A E A
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;