3D Structure for uvig_201625_CDS_0025 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 87.04 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_201625_CDS_0025 1 AcrIE1 0.70 View Alignment uvig_201625_CDS_0025 M K H K -R N -Q T K R L F S R -S T Y -M E M -L -I K -D -S -Q R N F E -R A E R L L G D L K L K -N Y I I A G L (60)
M +K + E +L + L
AcrIE1 M E K K L S -D A -Q --V -A L -V A A W R -K -Y -P D -L -R E -S L E E A -A S I L S L ---I V -F Q A E T L
uvig_201625_CDS_0025 E K E N E E L K K R V -N -K L K D D A T F Y H T Q W G K K I D I C K D L E R E L E Y T K R -R K W -W M -I W S -L (119)
EL + ++A + ++ E+
AcrIE1 S D Q A N E L A N Y I R -R Q G L E E A E G A C R N I D I M R A K W V E V C G E V N Q H G I R V Y G D -A I D R D V D
uvig_201625_CDS_0025 2 AcrIC3 0.59 View Alignment uvig_201625_CDS_0025 M K H K R N ---Q ----T K R L -F S -R S -------T Y M E M L I K D S Q R N F E R A E -R L L G D L K L K N (60)
M + + L + + R E
AcrIC3 M S -I -Q V T S T N G R T V -N L E I -E L -G S V V A S S G Q V K F M A D K T D R G L E S R -F L ---------
uvig_201625_CDS_0025 Y I I A -G L E K -E N -E E L K K -R V -N -K L K D D A -T -F Y -H -T -Q W G -K -K -I D I C K D L E R E L E (120)
+ + + A ++ + REL+
AcrIC3 -V P E A -G N R R I E V A ----L T -G -R -D L E A A N -A -L F -S -E -L A A -S -V -E A T N E M Y R E L D
uvig_201625_CDS_0025 Y T K R R K W W M I W S L (133)
+ +
AcrIC3 A E R A Q I N K A L E -G
uvig_201625_CDS_0025 3 AcrIB9 0.55 View Alignment uvig_201625_CDS_0025 M K H -K ---R N Q -T K R L F S R -S T Y -M E M L I K D S ----------------------------(60)
M + + +
AcrIB9 M N K F A F E N D K Y L E R N I K A V V E K -I A R D F N L H -L K S K Y S K D C E F T V V A D N S F D N I E N S T I F
uvig_201625_CDS_0025 ---------------------------------------------------Q R N F E R A E R (120)
+ A
AcrIB9 L E I K R N D G K A C Q D H H I Y A E Y E C D E D D N E Y I A L T V K F Y G S S A S N Q I N T V Q G I K -S S K Y A S C
uvig_201625_CDS_0025 L L -G D L -K L K N Y I I A G L -E K E N E E L K K R V N K L K D D A T F Y H T -----Q W -G -K K I -D I C K D (180)
++ D + I L K E NK + ++ + K DI D
AcrIB9 I V S -D T D N Q L S K S I H E L N L K K E K E Q Q E A W N K K E A E Y A R K K Q A Y V S Q S Q R -E K -Y E D I -F D
uvig_201625_CDS_0025 L E R E L E Y T K R R K W W M I W S L (199)
L + + +
AcrIB9 L P F D F Y D Y I D K --K E Q G L I
uvig_201625_CDS_0025 4 AcrIIA11 0.54 View Alignment uvig_201625_CDS_0025 M K H -K R -N -Q ------T K R -L ---------------F S R ------S -T Y ---------M E (60)
M + +
AcrIIA11 M A D M T L R -Q F C E R Y R K G D F L A K D R E T Q I E A G W Y D W F C D D K A L A G R L A K -I W G I L K G I T S D
uvig_201625_CDS_0025 M L I K D S -------Q -R -N F E ----------R A E -R L L G -----------D L K L K -----N (120)
++ + K
AcrIIA11 Y I L D N Y R V W F K N N C P -M V G -P L Y D D V R F E P L D -E E Q R -D E L Y F G V A I D D K R R E K K Y V I F -
uvig_201625_CDS_0025 ---Y ---I I A -G L E K E N E E L K K R V N K L K D D A T ---F ---Y H -T Q W G K -K I -D I C K D L -E R (180)
E++ +N D++ F + ++
AcrIIA11 T A R N D Y E N E -C -G F N N V R E V R Q F I N G W E D E L K N E E F Y K A -R E -K K R Q E -M E E A N N K -F A E
uvig_201625_CDS_0025 E L E Y T K R R K W W M I W -S -L (198)
W +
AcrIIA11 I M Q R A -D E I L W N L -K -E D
uvig_201625_CDS_0025 5 AcrIE6 0.53 View Alignment uvig_201625_CDS_0025 M K H K R N Q T K R L F S R S T Y M E M L I K D S Q R N F E R A E R L L G D L K L K N Y I I A G -L E K E N E E L K K R (60)
M N T L + A+ L + +
AcrIE6 M N ---N D T E V L E ---Q -------Q I K A F E L L A D E L K D R ---L P T L E I -L --------S P M
uvig_201625_CDS_0025 V N K L K D D A T F Y -H T Q W -G -K -K -I -D I -C -K -D L -E R E L E Y T K R R K W W M I -W -S -L (116)
+ + Q E I
AcrIE6 Y T A V M V T Y D L I G -K Q L A -S -R -R -A -E L -I -E I -L E E Q Y P G H A A D L -S -I K -N L C P
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;