3D Structure for uvig_196997_CDS_0005 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 90.36 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_196997_CDS_0005 1 AcrIE6 0.76 View Alignment uvig_196997_CDS_0005 M E D F K K R L L E E Y T Q L Q D R F N K L D E A L S S E G F S D K V G P F Q Y N M M I L Q Y H G M A T Y L S A L K L R (60)
M L L + L + + + Y+ ++Y L ++
AcrIE6 M N N D T E V L E Q Q I K A F E L L A D E L K D R L P T L ---E I L S -P M Y T A V M V T Y D L I G K Q L A S R R A E
uvig_196997_CDS_0005 L D N L D ----L T D -N --S N D T -Y N (83)
L + S +
AcrIE6 L I E I L E E Q Y P G H A A D L S I K N L C P
uvig_196997_CDS_0005 2 AcrIIC4 0.63 View Alignment uvig_196997_CDS_0005 M E -D --F K K R L --L -E -------------E ----Y T -Q L Q D -R F N K L D E A L S S E G F S D K V (60)
M + ++ F+ + + +E S +
AcrIIC4 M K I T S S N F A T I A T S E N F A K L S V L P K N H R E P I K G L F -K S A V -E Q F S S A R D F F K N E N Y S K E L
uvig_196997_CDS_0005 G P F Q Y N M M I -L Q Y H G M A T Y -L S A L K -L R L D -N L D L T D N S N D T Y N (104)
+ L L + +
AcrIIC4 A E K ---F N K E ----A V N E -A V E K L -Q K A -I D -L A E K --Q G I Q -F
uvig_196997_CDS_0005 3 AcrIE1 0.63 View Alignment uvig_196997_CDS_0005 M E D ----F -K K R -L L E --------------E -Y -T -Q ----L Q D ---R F N K L D E A L S -S E (60)
ME L+ + + L
AcrIE1 M E K K L S D -A Q V -A L V A A W R K Y P D L R E S L E E -A -A -S -I L S L I V F Q A E T L S D Q A N E L A N Y I
uvig_196997_CDS_0005 G F S D -K -V G P F Q Y N M M I L Q Y H G M A T Y L S A L K L R L D N L D ----L -T -D N S N D T Y N (114)
G + M + + +
AcrIE1 R ---R -Q -G L E E A E G A C R N I D I M R A K W V E V C G E V N Q H G I R V Y -G -D -A I D R D V D
uvig_196997_CDS_0005 4 AcrIIA28 0.57 View Alignment uvig_196997_CDS_0005 M E -D ----F K K R L L E -E Y T Q L Q -D -R F N K L D E A L S S E G F S D ---K -V G P F -Q Y -N M -M I L (60)
M LL Q FN + S+
AcrIIA28 M K T I F T K K Q T E E L L N D I S I E K Q K -E L F N S M H D F R S Q H A K E A R I P -G W S D -K Y -N K -L E K K
uvig_196997_CDS_0005 Q Y H G M A T Y L S A L K L R L D N L D -L T D N S N D T --Y N (93)
+ L++ SN +
AcrIIA28 M L S D F E E V T G I K Y D T L E S E L I W D N L S N K F L Y N S
uvig_196997_CDS_0005 5 AcrIF23 0.57 View Alignment uvig_196997_CDS_0005 M E D F K K -R ---L L E -----------------E Y ----T ----------------------(60)
M F +
AcrIF23 M T N F Q -T W L D S A --D I P V Q Q N G Q W I D L E T G I A -Y D P S -Y N Y A A N T R R A S L S P R G I D A R A V
uvig_196997_CDS_0005 --------------------Q L Q D R ----F N K L D E A L S S E -G F -S D K V G P ----F -Q -Y N (120)
+ N + + N
AcrIF23 A K T F G G R A L T G T A R Q K E W A E K I R A E K V Q Q M N Q D Q A E M A C D P S G L -L T A A K F W I E -N -R -N
uvig_196997_CDS_0005 -M M I L Q Y H G M A T Y L S A L K L R L D N L ---D L T ------D ----N -S N D T ---Y -N (173)
+ G + AL + ++
AcrIF23 D -S A Q E I A G F V M Q Q K A L L A Q H R S A K A A G Q -A D K V A K I A A E Y -N A --L T A R W G F
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;