3D Structure for uvig_195816_CDS_0014 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 87.45 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_195816_CDS_0014 1 AcrIE6 0.70 View Alignment uvig_195816_CDS_0014 V K E N S I K N E R S S -I E E D I K -I L E E M I E N A N I E N M D M N N C F G G E H I E A I E H I L S D Y K R V L K (60)
N E K
AcrIE6 M -N N D ----T E V L -E ----Q --------------------------Q -------I K A F E L
uvig_195816_CDS_0014 E N E E L K D K Y A T F V K M S S E V I A N S I P V Q -K V K -D K -I -S E R Q -F E L Q Q E Y K D F E D D -A I L T (120)
+ELKD+ T V E + ++
AcrIE6 L A D E L K D R L P T L E I L ----S P M Y T A V M V T Y -D -L I -G -K Q L A -S R R A E L I E I L E E Q -Y P G
uvig_195816_CDS_0014 V L Q E -L I E -M K -Y (133)
+ +
AcrIE6 H A A D L -S I K N L C P
uvig_195816_CDS_0014 2 AcrIE1 0.59 View Alignment uvig_195816_CDS_0014 V K E N S I K N E R -S -S -I -E E D I K I L E E M I E N A N I -E N M D M N N C F G G E H I -E A I E H I L S D Y K (60)
E + +L + +E ++S
AcrIE1 M -E K K L ----S -D -A -Q -V ---A L V A A W R ----K ----Y -----P D L R E -S L E E A A S I L S
uvig_195816_CDS_0014 R V L K E N E E -L K D -K Y A T F -V K -M S S E V I A N S -I P V Q K V K D K I S E R Q F E L Q Q E Y K D F E D D A (120)
++ + + + + + + + I +
AcrIE1 L I V F ----Q A E -T L S D Q -A N -E L A N Y I R R Q G L E E A E G A C R N I D I M R A K W V E V C G E V -N Q H
uvig_195816_CDS_0014 I L T V L Q E L I E M K -Y (134)
+ V ++I+
AcrIE1 G I R V Y G D A I D R D V D
uvig_195816_CDS_0014 3 AcrIIA32 0.58 View Alignment uvig_195816_CDS_0014 V --------K -E N S I K N ---E --------------R -S -----S I E E D I K I L E E M I -E N A (60)
N + E ++ +
AcrIIA32 M K N E D G K L V V S K A H F G N M I R N C Q S V E D F K K S F E R L -T -Y Y S S E N R E S T V R Q R L K I A E K -E
uvig_195816_CDS_0014 N I -E -N M D M N N -C F G -G -E H I E A I E H I L S D Y K R V L K E N -E E -L K D K Y A T F V K M S S E V I A N (120)
IL + +
AcrIIA32 Y N F -K A G V K E D L E I K N -T ----T D K E I L D Y V R N E ----L -S K ----I D S K K Q A D K N W S E -
uvig_195816_CDS_0014 S I P V Q -K V K D K I S E R Q F -E L Q Q E -Y K D -F E D -D A I L T V L Q E L I E M K Y (167)
+ + + + +L + + E
AcrIIA32 -K N R -E H R N Y L S K R ---S S A R S -F I N N N A T -H E D L L E L K K I I E E K L K
uvig_195816_CDS_0014 4 AcrIC3 0.57 View Alignment uvig_195816_CDS_0014 V K E N S I K N -E R S S I E E D I K I L -E E M I E N A N I -E N M D M N N C F G G E H I E A I E H I L -S -D -Y K (60)
++ + + L + + + +
AcrIC3 M S -I Q V T S T -N ---G R T V -N L E -I E L G -S V V A -S S G Q V -----------K F M A D -K -T --
uvig_195816_CDS_0014 R V L K E N E E L K D -K Y -A T F ---V K --M S S E V I A -N S ----I -P V Q K V K D K I S E R Q F E L Q Q E (120)
+ I + + SE
AcrIC3 ---------D R G -L E S R -F L V P -E A -G N R R I -E V -A L T G -R D L E A A N A L F S E L A A -S V E A
uvig_195816_CDS_0014 Y K D F E D D A I L T V L Q E L I E M K -Y (142)
+ + +
AcrIC3 T N E M Y -R E L D A E R A Q I N K A L E G
uvig_195816_CDS_0014 5 AcrIIC4 0.55 View Alignment uvig_195816_CDS_0014 V K E N S I K N E R S S I E E D I K -I L E E M I E N A N I E N M D M N N C F G G -E H I E A I E H I L S D Y K R V L K (60)
K + + + EN
AcrIIC4 M K -I T S -S N F ---A ----T ----I A T ---S E N --F A -K L -S V ------------------
uvig_195816_CDS_0014 E N E E -L -K -D -K Y A T F V K M S S E V I -A -N S -I P V Q K V K D K I S --E R Q F E L Q Q E Y K D F E D D A (120)
+ + ++D + EL
AcrIIC4 ----L -P -K -N H R E P I K G L F ----K -S -A V E Q F S S A R D F F K N E N Y S K E L A E K F N K E A V N E
uvig_195816_CDS_0014 I L T V L Q ----E -L I E M -K -Y (140)
++ LQ +
AcrIIC4 A V E K L Q K A I D -L A E K Q G I Q F
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;