3D Structure for uvig_195307_CDS_0044 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 96.00 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_195307_CDS_0044 1 AcrIIA7 0.74 View Alignment uvig_195307_CDS_0044 M D F G E A I K L L K Q G K R V Q R E G W N G K K Q Y -I E L -A T S I S Y ----V N -T -K N E T I N -------(60)
M FG A+ LK G+ V R GWNGK I V ++
AcrIIA7 M T F G Q A L E S L K R G H L V A R K G W N G K G -M F I F M R P E D S L P T N M I V -N -Q V -K S L P E S F K R W V
uvig_195307_CDS_0044 -A -E -H D -A ----I -G -N K A I A F V G T S G -V Q L G W L A S Q A D M L A E D W R I V E (110)
H + + G + GWLASQ DMLA DW IVE
AcrIIA7 A -N -N H G D S E T D R -I K F T A Y L C M K A A D G T I V N G W L A S Q T D M L A N D W V I V E
uvig_195307_CDS_0044 2 AcrIIA4 0.56 View Alignment uvig_195307_CDS_0044 M D F G E A I K L L K Q -G K R V Q R E G -W N -G K K Q Y I E L -A T S I S Y V N T K N E T I N A E H D A I G N K A I (60)
M ++I+ +K+ V G + Q I + + ++
AcrIIA4 M N I N D L I R E I K N K D Y T V K L S G T D S N S I T Q L I I R V N -N ------D G N E Y V I S E S -E N E S I V
uvig_195307_CDS_0044 A F -V -G -T -S G V Q L G W L A S Q A D M L A E D ----W R -I -V E (98)
+ + + +
AcrIIA4 E K F -I S A -F K N G W N Q E Y E D E E E F Y N D M Q T I T L K S -E L N
uvig_195307_CDS_0044 3 AcrIIA12 0.53 View Alignment uvig_195307_CDS_0044 M D ---F -G -E A I ---K L L K -Q -G K R V Q R -E G W -N -G -K K -Q Y I E L A T S I S Y V N T K N E T I N (60)
M ++I K +K + N QY V+
AcrIIA12 M S K T M Y K -N D V I E L I K N A K T -N N E E L L F T S V E R N T R E A A T Q Y F R C P E -K -H V S D A G V -Y Y
uvig_195307_CDS_0044 A E H D A I G N K A I A F V G T S G V Q L G W L A S Q A -D M L A E D W R I V E (100)
E + D +
AcrIIA12 G E D F --E F D G F E I F -E D D L I Y T R S ----Y -----D K E E L N
uvig_195307_CDS_0044 4 AcrIF18 0.50 View Alignment uvig_195307_CDS_0044 M D F G E A I K L L K Q G K R -V -Q R E G -W -N G K K Q Y -I E L A T S I S Y V N T K N E T I N A E H D A I G N -K (60)
M + K ++ W G +Y ++ ET + H
AcrIF18 M T T --I ----K A A Y -I -S -K D Q N W N D G T T T Y W F D V ---------N G E T F G V V H G -G E -S -
uvig_195307_CDS_0044 A -I A F V G T S G V Q L G W L A -S Q A D M L A E D W R I V -E (93)
+ V G+ Q + + E
AcrIF18 W N A K V V D C D G A P S D Q Y T V D Q F --N I -T E D M I A E
uvig_195307_CDS_0044 5 AcrIIA24 0.49 View Alignment uvig_195307_CDS_0044 M -D F G E A I K L L K Q G K R V -Q R E G W N G K K Q Y I E L A T S I S Y V N T K N E T I N A E --H D A -I G N K A (60)
M ++K +K+ N + +
AcrIIA24 M K K A Q Q L L K E I K T N N V S Y A I M --D E D N E I Y C N K E -------T N N I M D I Y G Y D N -E -N G H F
uvig_195307_CDS_0044 -I A F V G T -S G V Q L G W -L ------------A -S Q A D M L A E D ----W R -I ------V -E (117)
+ G + D E
AcrIIA24 Y G V Y G D V V D G Q I D S R Y F S D D A I L N A I D K L L F L G D P I K R T D L P S D A -D -F K R T F F F E E
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;