3D Structure for uvig_194423_CDS_0065 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 84.27 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_194423_CDS_0065 1 AcrIIA21 0.74 View Alignment uvig_194423_CDS_0065 M D N V I N K L S R D S I D Y N Y S L D F K G L K I K D K A D D G T E Y C K T I Y Y M E H K A I I D D A L L E I -M -D (60)
MD + +I +LL
AcrIIA21 M D -Y D -N E N -------------------------------------Y L I P K I L L Q D D F Y S
uvig_194423_CDS_0065 K E N T Y V R K V V R Y I A K N I P Y ---------G --V N H I S L S N K D I A A Y Y N C D K S N I S K G I K R L (120)
+ V + ++ ++A +C +++ RL
AcrIIA21 S L S A K D I L V Y A V L K D R Q I E A L E K G W I D T -D G S I Y L N F K L I E L A K M F S C S R T T M I D V M Q R L
uvig_194423_CDS_0065 V E L D V I G R L Y D K I P N N M L P K N T Y I I N H N Y I Y R G S I K K L R K D I L E Q R N N I N D (171)
E+ +I R Y +
AcrIIA21 E E V N L I E R E R V D ------V F Y G Y S L P Y K T Y -I N -------------E ---V
uvig_194423_CDS_0065 2 AcrIA3 0.52 View Alignment uvig_194423_CDS_0065 M D N -V I -N K -L S R D S I D Y N Y S L D F K G L K I K D K A D D G -T E Y C K T I Y Y M E H K A I I D D A L -L E (60)
M + + K +
AcrIA3 M S F Y I M Y I -K V K E -M --------------------S E -Q --K ---------------Q I -
uvig_194423_CDS_0065 I -M D K E N T Y V R K V V R Y I A K N -I P Y G V N H I S ---L S N K D I A A -Y -Y N C D K S N I S K G I K R L V (120)
K + + + S+ D+ + ++
AcrIA3 S L R S K Q K E L L Q R F F E I A E V -D -E -N G D L C I P L Y D S S G D L T -L -F K ----Q ----D S R K Y Q
uvig_194423_CDS_0065 E -L D V I G R -L Y D K I P N N M L -P K N T Y I I -N H N Y I Y R G -S I K -K -L R K D I L E Q -R N N I N D (178)
R L I + R + +++Q ++ +
AcrIA3 -M Y A Y -F R I L R L I ----K -K -Q I F F I K V -K K V -K R D K K F L C -M -H S N V I D Q V K S V L E S
uvig_194423_CDS_0065 3 AcrIE5 0.43 View Alignment uvig_194423_CDS_0065 M D N V I N K L S R D S I D Y N Y S L D F K G L K I K D K A D D G T E Y C K T I Y Y M E H K A I I D D A L L E I M D K E (60)
M ++
AcrIE5 M S ---------------------------------------------N D R N G I I N Q I I D Y
uvig_194423_CDS_0065 N T Y V R K V V R Y I A K N I P Y G V N H I S L S N K D I A A Y Y N C D K S N I S K G I K R L V E L D V I G R L Y D K I (120)
+ D+ + + L D I D
AcrIE5 T ---------------------G -----------T D R D H A E R I Y E E L R A D D R I Y F D -D --
uvig_194423_CDS_0065 -P N N M L P K N T Y I I N H N Y I Y R G S I K K L R K D I L E Q R N N I N D (159)
L ++ +I D+ I +
AcrIE5 S -V G -L D R Q G L L I R E D ----V -------D L M A V A A E I -E
uvig_194423_CDS_0065 4 AcrVA3 0.42 View Alignment uvig_194423_CDS_0065 M D N V I N K L S R D S I D Y N Y S L D F K -G L K I K D K A -D D G T E -Y C -K ---T -I -------Y Y -M E (60)
M + SI D+ A + G Y
AcrVA3 M V G K S K -I D W Q S I ------D W T K --T N A Q I A Q E C G R -A Y -N T V C K -M R G K L G K S H Q -G --
uvig_194423_CDS_0065 -H -----K --A -I -----I -------D D A L L E I M D K E N T Y V R -K V V R Y I A K N I P Y G V N H I (120)
+ K A + + K +
AcrVA3 A K S P R K D K G I -S R P Q P H L N R L E Y Q A L A T A K A K A S P K A G R ---F --E T N T ---K -A -K T W T
uvig_194423_CDS_0065 S -L S N K D I A A Y -Y N -C D K S N I -S -K G I K -R L V E L D V I G R -L Y D K I P N N M L P -K N T Y I I N H (180)
+ D +
AcrVA3 L K S P ---D N K T Y T F T N L M H -F V -R T N -P H L -F D P D D V V W R T -K -S ------N G V E W C R A S
uvig_194423_CDS_0065 N Y -I Y -R G S I K -K ---L R K -D I ---L -E -Q R N N I N D (216)
+ + K +
AcrVA3 S -G L A L L A K R K K A P L S W K -G --W R L -I -S L T K D N -K
uvig_194423_CDS_0065 5 AcrVA2 0.42 View Alignment uvig_194423_CDS_0065 M D N V ------I N K L S R D S I D Y N Y S -L D -F K G L K I K D K --A -D D G T E Y C K T I Y Y M E H K A I I (60)
M NK+ D + M ++
AcrVA2 M H H T I A R M N A F N K A F A N A K D C Y -K K --M -Q A -----W H L -L --N K -P K H A F F P M Q N T P A L
uvig_194423_CDS_0065 D D A -L L ----E -I -M ---D K ---------------E ----------------------N T (120)
D L
AcrVA2 D N -G -L A A L Y -E -L -R G G K E D A H I L S I L S R L Y L Y G A W R N T L G I Y Q L D E E I I K D C K E L P D D
uvig_194423_CDS_0065 Y V R K V -V -R Y I A K N -I P Y G V N H I -S L S N K D I A A Y Y N C ---D K S N I S K G I K -R L V -E -L D V (180)
+ +S+ IA + +
AcrVA2 T ----P -T S I F L N -L P D -W C V -Y V D I S S A Q I A T F D D G V A K H I K G F W A I Y -D I V -E -M N G I
uvig_194423_CDS_0065 I G R ----L Y D -K I P -N N M L P K N T Y I I -N H N Y -------I ----Y R --------G ------(240)
+ D N + I+ + + G
AcrVA2 N H D V L D F V V D T D -T D D N V Y V P Q P F I L S S G Q S V A E V L D Y G A S L F D D D T S N T L I K G L L P Y L L
uvig_194423_CDS_0065 ------------S I K -K L R K ---------------------------------------- (300)
+ R
AcrVA2 W L C V A E P D I T Y K G L -P V S R -E E L T R P K H S I N K K T G A F V T P S E P F I Y Q I G E R L G S E V R R Y Q
uvig_194423_CDS_0065 --------------------------------D ---I L -E --------Q -R N N I N D (356)
++
AcrVA2 S I I D G E Q K R N R P H T K R P H I R R G H W H G Y W Q G T G Q A K E F R V -R W Q P A V F V -N S G R V S S
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;