3D Structure for uvig_194309_CDS_0014 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 82.10 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_194309_CDS_0014 1 AcrIIA27 0.74 View Alignment uvig_194309_CDS_0014 M N K I K K E Y L V N V -D -----M ----R -W S I D Y E V K A C S E T E A K R L A W E K F K K N L -------(60)
M K + V + +I Y V A + EA + A E +
AcrIIA27 M -K ---T F N I I V S E S A N L K E H S S E L V D N I I Y K V E A K N R R E A F K K A R E E Y S F S S K W K F N M R
uvig_194309_CDS_0014 ---------P K -K -C -F -E -I L A D -K K (87)
L
AcrIIA27 D L T A I D N T H R -R -A W G -R R Y -L R V E E A
uvig_194309_CDS_0014 2 AcrIE2 0.64 View Alignment uvig_194309_CDS_0014 M N K -I ------------------K K E -------------------Y L V N V D -M -R -W ---(60)
MN + +
AcrIE2 M N T Y L I D P R K N N D N S G E R F T V D A V D -I T A A A K S A A Q Q I L G E E F E G L V Y R E T G E S N G S G M F
uvig_194309_CDS_0014 S I D Y E V K A C S E T -E A K R L A W E K F -K K N L P K K C F E I L A -D -K K (102)
++ ++ + T P
AcrIE2 Q A Y H H L H G T N R T E ---T T -----V --G Y P ----F H --V -M E L
uvig_194309_CDS_0014 3 AcrIC9 0.57 View Alignment uvig_194309_CDS_0014 M N K I -K K E Y L V N V D M R W S I -D Y E V K A C ----S E -T -E -A K -R ----L A -----------W (60)
M Y ++ ++ + + W
AcrIC9 M E T K M T S F Y K I T -A Y N S Q A L Y F W G T D A D V D R Y -V -D -W L -N -R D R E I N V Y A A E A I P E A E W
uvig_194309_CDS_0014 E K ---F K K -N -L -P K ---K -C F -E I -L A -D K K (92)
+
AcrIC9 A Q Y E G R D -D -V -L S G E E C -G W -D D -F M -S A E A
uvig_194309_CDS_0014 4 AcrIF19 0.57 View Alignment uvig_194309_CDS_0014 M N K I ------K K E -Y L V -N V -D --M R --W S I D Y E --V K A ------C --------------(60)
M + + S+ V+
AcrIF19 M K P L H T M N Y D N N -Q M S L V Y E S Y D E Y G F E Y S V K L K I S V R D Y R G I D V S A F N A F P E W E D T L R M
uvig_194309_CDS_0014 -----S E T ---E -A K -R -L -A -W -E -K -F -K K N L P K K C F -E I L A D K K (107)
S P
AcrIF19 R D R V M S V E E I E N A M -I -S -R -Y -K -S -L -F -I A P P D --C T --Y E F D I
uvig_194309_CDS_0014 5 AcrIA 0.57 View Alignment uvig_194309_CDS_0014 M N K I -------------------K -K E ----------Y -L -V N -V D -M R W S -I -D -Y E V K (60)
M + E ++ +
AcrIA M V E V K Q K T L S Y K L K I N T R D Y S I T L E A E L K A V I N V K G N D L -V -Y E D K Q Q K F V G -Y -I E T I S
uvig_194309_CDS_0014 A ----C ----S E T E A -K R L A W E K F K K N L ------P K K C F E I L A D K K (106)
+ E+ +EK L ++
AcrIA S Y E T K -N A K E N A D E I L -N E R F E K Y A N G L K V L E Q T A E A I N A E -I E I E
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;