3D Structure for uvig_191415_CDS_0006 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 93.78 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_191415_CDS_0006 1 AcrIB1 0.84 View Alignment uvig_191415_CDS_0006 M I D A C W E K F T N K -----L A G L A F R F E V N P L S C -G N P E H F A E Y I R F C A I S D N K A G R S V T H V (60)
M K N + + F + G+ ++ AI K S T V
AcrIB1 M E S K N L R K L L N E Y E E I D I N E M L K N F --R S I K N S G T K N D I E I F L H E K A I K F E K S S I S S T Y V
uvig_191415_CDS_0006 L L N K E K E V I V G Y I S L K A S S L L T E I E -V R G -K Q V -------------W ----T -G E P A L E I (120)
+ + E I+GY ++ SL+ G + +
AcrIB1 V F S -E D N E I L G Y F T I A N R S L V I P -K E N F G I L S -K T Q Q K K L G N S A A I L K N G D -L M T S S F L L
uvig_191415_CDS_0006 A E L A V H K N Y -E -R Q G V G R A L I D I A I T V A T Q T N D I I L G I R H L V L A A --D P K A V P F Y E R M G F (180)
L + GR L+ A + + ++ ++ + L +PK++ FY GF
AcrIB1 G Q L G K N Y S D D I E N L I T G R E L L T F A Y D L F L K I K E -L I N V K Y I W L E C Q N E P K L I S F Y Q N F G F
uvig_191415_CDS_0006 S P I R D Y F H I P Q D A A N A K C V P M F M Q L Y (206)
+ + M M L
AcrIB1 K M L E S L -T --S --E -E G L K V M I M E L K
uvig_191415_CDS_0006 2 AcrVA5 0.58 View Alignment uvig_191415_CDS_0006 M I D A C W E K F T N K -L A G L A F R F E V N P L S C G N P E H F A E Y I R F C A I S D N K A G R S V T H V L L N K E (60)
M G + E
AcrVA5 M K I E L -------S -G G Y I C Y S I ---------E ----------------------------
uvig_191415_CDS_0006 K E V I V G Y I S L K A S S L L T E I E V R G K Q V W T G E P A L E I A E L A V H K N Y E R Q G V G R A L I D I A I T V (120)
E + I + V + RQG+G LID + V
AcrVA5 -------------------E ----------D E V T I D M V E V T -T -K R Q G I G S Q L I D M V K D V
uvig_191415_CDS_0006 A T Q T N D I I L G I R H L V L A -A -------D P K A V P F Y E R M G F S P I R D Y F H I P Q D A A N A K C V P M (180)
A + L ++ FY F M
AcrVA5 A R E -V -----G L P I G L Y A Y P Q D D S I S Q E D L I E F Y F S N D F E Y D P -D D ---V ---D --G R L M
uvig_191415_CDS_0006 F M Q L Y (185)
AcrVA5 R -W -S
uvig_191415_CDS_0006 3 AcrIC11 0.42 View Alignment uvig_191415_CDS_0006 M I D A C W E K F T N K L A G -L A F R F E V N P -L S C G N P E H F A E Y I R F C A I S D N K -A G R -S V T H V L L (60)
M ++ +E + G V LL
AcrIC11 M N K E T Q -I T ------A ------S -A V ---V G E D K R L E F L S K H F G V R F A R R G E A L V F A W L L
uvig_191415_CDS_0006 N K ----E -K -E V I V G Y I S L K A S S L L T E I E V R G K Q V -W T G E -P A L E I A E L A V H K N Y E R Q G V (120)
+ Y +L S L I E +
AcrIC11 R L A K V P -I -E W T R L Q Y Y T L ---S ------N --S -G F Y L A P R -E L R I S E C E -L ----S A D A
uvig_191415_CDS_0006 G R A -L I D I A I T V A T Q T N D I I L G I R H L V L A ---A ------D ----P K A V P F Y E R M G F S P -I (180)
+ +T+ ++ ++ A
AcrIC11 -V G I -V A T M L T L R -----Q --L A H E S A A C V E A -D S T Y P A A K L A V T -A S V K F A Q Q Y H H -L -
uvig_191415_CDS_0006 -R -D Y F -H -I P Q D A A N A K C V P M F M Q L Y (207)
Y A + +
AcrIC11 A -A -Y S V -K ---H ---A E S I N I Y R A I D
uvig_191415_CDS_0006 4 AcrVIA1_Lse 0.40 View Alignment uvig_191415_CDS_0006 M I --D A -C W E K F T N K L A G L A F R F E V N P L S C G N P E H -F A E Y I R F C A I S D N K A G R S V T H V L L (60)
MI L + E + + +
AcrVIA1_Lse M I Y Y I -K D L K V K G K I F E N L M --------N K ---E -A V E -G L I T F L K K A ----E F E --I Y S
uvig_191415_CDS_0006 N K -E K E V I V G Y I S -L K A S S L L T E I E V R G -K Q V W T -G -E -P A L E ---I A E L A V H K N Y E --R (120)
+ S ++ ++ ++ +
AcrVIA1_Lse -R E N Y S K Y N K W F E M W -K -S ----P ---T S -S L V -F -W -K N Y S F R C H L L F V I E K D --G E C -
uvig_191415_CDS_0006 -Q -G V G R A L I D I A I T V A T Q T N D I I L G I R H L V L A A ---D -P -K A V P F Y E R M G F S P I R D Y F H (180)
+ + + ++++ + + YE + + F
AcrVIA1_Lse L -G -I P A S V F E S V L Q I Y L A ----D ----P F -A P D T K E L F -V E V C N L Y E C L A D V T V V E H F E
uvig_191415_CDS_0006 I --------P Q D A A N A K -------------------------------------------(240)
+ +
AcrVIA1_Lse A E E S A W H K L T -H N E T E V S K R V Y S K D D D E L L K Y I P E F L D T I A T N K K S Q K Y N Q I Q G K I Q E I N
uvig_191415_CDS_0006 ---------------------C ------------V P M F M Q L Y (282)
L
AcrVIA1_Lse K E I A T L Y E S S E D Y I F T E Y V S N L Y R E S A K L E Q H S K Q I L K E E L N
uvig_191415_CDS_0006 5 AcrIIC4 0.39 View Alignment uvig_191415_CDS_0006 M I D A C W E K -F T N K L A G L A F R F E V N P L S C G N P E H F A E Y -I R F C A I S D N K A G R S V T H V L L N K (60)
M A +
AcrIIC4 M K I -T S -S N ----F A --------------T ------I A ----------------------
uvig_191415_CDS_0006 E K E V I V G Y I S L K A S S L L T E I E V R G K Q V W T G E P A L E I A E L A V H K N Y E R Q -G -V G R -A L I D -(120)
+ A L V R I
AcrIIC4 ---------T -------------S E ------N ---F A K L S V ---L -P -K -N -H R E -P I K G
uvig_191415_CDS_0006 I A I T V A T Q T N D I I L G I R H L V L A -A D P K A V P F Y E R M G F -S P I R D Y F -H I P Q D -A A N -A K --(180)
+ A A F + + + A+
AcrIIC4 -L F K S A V E --------------Q -F S S A R D F F K N E N Y S K E L A E --K --F N K E A V -N E -A V
uvig_191415_CDS_0006 --C ----V ---P M F M Q L Y (198)
Q
AcrIIC4 E K L Q K A I D L A E K Q G I Q -F
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;