3D Structure for uvig_191262_CDS_0011 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 92.19 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_191262_CDS_0011 1 AcrIE6 0.73 View Alignment uvig_191262_CDS_0011 M S K E E R H ---L Q T K ----I R -M F E D I L L R T -K -------N P S Q V D N I Q M E L T R M R A K L Q K (60)
M+ + + D L + D I L RA L
AcrIE6 M N N D T E V L E Q Q I K A F E L L A -D E L K D R L P T L E I L S P M Y T A V M V T Y D L I G K Q L A S R R A E L I E
uvig_191262_CDS_0011 L ----Y ---F -K R -M ---E S (80)
+ Y
AcrIE6 I L E E Q Y P G H A A D L S I K N L C P
uvig_191262_CDS_0011 2 AcrIF23 0.59 View Alignment uvig_191262_CDS_0011 M S K E ---E -R -H --------L Q --------------------------------------(60)
M+
AcrIF23 M T N F Q T W -L -D -S A D I P V Q Q N G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K
uvig_191262_CDS_0011 ----------T ----K ------------------I R -------M -F -E -D -I L L -R T K -N (120)
+ +
AcrIF23 T F G G R A L T G T A R Q K E W A E K I R A E K V Q Q M N Q D Q A E M A C D P S G L L T A -A -K -F W I -E N R N D S
uvig_191262_CDS_0011 P S Q V D N I Q M E L T ----R -M R A -K -L -Q --------K -L ----Y F K R M -E --S (172)
+ + M Y
AcrIF23 A Q E I A G F V M Q Q K A L L A -Q H -R S -A -K A A G Q A D K V A -K -I A A E Y N A L T A R W G F
uvig_191262_CDS_0011 3 AcrIIC4 0.55 View Alignment uvig_191262_CDS_0011 M S -K --E E R H ------L -------Q T ----K --------I R -M F E D ----I L L -R T K ---(60)
M +
AcrIIC4 M K I T S S N F A T I A T S E N -F A K L S V L P K N H R E -P I K G L F K S A V E -Q F S S A R D F F -K N E N Y S K
uvig_191262_CDS_0011 --N P S Q V D N I Q M E L T -R M R A K L Q K L Y F K R M -E S (93)
+ E+ K+ L K
AcrIIC4 E L A E K F N K E A V N E A V E -K L Q K A I D L A E K Q G I Q F
uvig_191262_CDS_0011 4 AcrIIA28 0.53 View Alignment uvig_191262_CDS_0011 M S --K ---E E R H L -Q T K -----------I R M F E D -I L -L -R -T K ---N -P S Q ----V D N I (60)
M L + + F +
AcrIIA28 M K T I F T K K Q T E E L L N D I S I E K Q K E L F N S M H D F R S Q -H A -K -E A R I P G W S -D K Y N K L E K K M
uvig_191262_CDS_0011 Q M E L T R M R A -K -L -Q -K -L --------Y F K -R -M E -S (97)
+ L S
AcrIIA28 L S D F E E V T G I -K -Y -D -T L E S E L I W D N L S N K -F L Y N S
uvig_191262_CDS_0011 5 AcrIE1 0.50 View Alignment uvig_191262_CDS_0011 M S ---K -E -E R H -L Q -------T ----K ------------------I R ----M F E D I L L R (60)
M L + + R
AcrIE1 M E K K L S D -A Q V -A L V A A W R K Y P -D L R E -S L E E A A S I L S L I V F Q A E T L S D Q A N E L A N Y I R R
uvig_191262_CDS_0011 T K N -------P S Q V D N I Q M E L T R M R A K L Q K -L ----Y F K R M --E -S (106)
+ ++D ++ Y +
AcrIE1 Q -G L E E A E G A C R N I D I M R A K W V E V C G E V N -Q H G I R V Y G D A I D R D V D
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;