3D Structure for uvig_190593_CDS_0029 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 82.31 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_190593_CDS_0029 1 AcrIE6 0.71 View Alignment uvig_190593_CDS_0029 M V F S A L N I Y H S Y G V G R V N I D E A S G C F I L R Q R I D I V -N A -E -R -A K -A F -S -R -L -T -V -L (60)
M + +L Q +
AcrIE6 M ------------N ----N -D ---T E V L E Q Q ----I -K A -F -E L -L -A D -E -L -K -D -R -
uvig_190593_CDS_0029 -F C T P D R L S G R D V -I I L N S D A I Q -R V C D E -F M V -A N S -E L F A L V Q E Y N R I A R T C G -M D E - (120)
T ++ A+ D + L+
AcrIE6 L -P T L ------E I L -S P M Y T A V M V T Y -D L I G K -Q L A -S R R A E L I E I L E E Q Y P G H -A -A -D
uvig_190593_CDS_0029 L R I T H L -G (128)
L I L
AcrIE6 L S I K N L C P
uvig_190593_CDS_0029 2 AcrIE1 0.60 View Alignment uvig_190593_CDS_0029 M V F S A L N I Y H S Y G V G R V N I --D E ----A S G C F I L R Q R I D I V N A E R A K A F S R L T V L F C T P D (60)
M L+ V V + + + + ++ + ++ L
AcrIE1 M E K -K L S D ---A Q V A L V A A W R K -Y P D L R E S L E E A A S I L S L I V F Q A E T L S D Q A N E L A N Y I R
uvig_190593_CDS_0029 R L S G R D V I I L N S D A I Q R V C D E F M V A N S E L F A L V Q E Y N R I A R T C G M D E L R I T H L G (114)
+ + +C + + E N D + +
AcrIE1 --------R Q G L E E A E G A C R N I D I M R A K W V E V C G E V N Q H G I R V Y G D -A I D R D V D
uvig_190593_CDS_0029 3 AcrIIC4 0.59 View Alignment uvig_190593_CDS_0029 M V F S A L N I Y H S -Y G V -G R V N I D E A -S G C F I L R Q -R I ---D -I -V N A -E R A -K -A F S R L T V (60)
M + S + E +L + + FS +
AcrIIC4 M K I T S -----S N -F -A -T I A T S E N F A K L S V L P K N H R E P I K G -L -F K S -A V E -Q -F S S A R D
uvig_190593_CDS_0029 L F C T P D R L S G R D V I -I L N S D A I -Q -R -V C D E F M -V -A -N S -E -L F -A -L V Q E Y N R I A R T C (120)
F + + ++ + +Q +A
AcrIIC4 F F K N -E N Y --S K --E -----L A E -K -F ----N K E -A -V -N E -A -V E -K -L Q K A I D L A E K Q
uvig_190593_CDS_0029 G M D E L R I T H L G (131)
G +
AcrIIC4 G -I ----Q --F
uvig_190593_CDS_0029 4 AcrIF23 0.57 View Alignment uvig_190593_CDS_0029 M V -F S -A L N -I -----Y H --S ----Y G --V -G --R --V N I --------------------(60)
M F+ L +
AcrIF23 M T N F Q T W L -D S A D I P V Q Q N G Q W I D L --E T G I A Y D P S Y --N Y A A N T R R A S L S P R G I D A R A V
uvig_190593_CDS_0029 ----------D E A S G C F I L R Q R I D I V N A E R A K A F S R L -T -V -L F C T -P D R L S G -R D V I I L (120)
A + +
AcrIF23 A K T F G G R A L T G T A R Q K E W A E K I R A E K V Q Q M N Q D Q A E M A -C -D -P S G L -L --T A A -K F ---
uvig_190593_CDS_0029 N S -D -A -I Q R V C D E F M V A N S E L F A L V Q E Y N R I A R T C -G ----M D E ---L R I T H -L -G (177)
+ E AL+ + +T
AcrIF23 W I E -N -R -N D S A Q E I A G F V M Q Q K A L L A Q H R S A K A A G Q A D K V A K I A A E Y N A L T A R W G F
uvig_190593_CDS_0029 5 AcrIC3 0.52 View Alignment uvig_190593_CDS_0029 M V F S A L N I Y H S Y G V G R V N I D E A -S G C F I L R Q R I D I V N A E R A K A F S R L T V L F C T P D R L S G R (60)
M +++ + VN++ + + + L F P+ R
AcrIC3 M -S --I Q V T S T N -G R T V N L E I E L G S V V A S S G Q V K F M A D K T D R G ---L E S R F L V P E A -G N R
uvig_190593_CDS_0029 D V I I -L N S D -------A -I Q -R -V -C -D -E -F M -V -A -N -S -E -L F A L V Q E Y N R I A R T C G (120)
+ + L+ L E I +
AcrIC3 R I E V A L T G R D L E A A N A -L F -S -E -L -A -A -S V -E -A -T -N -E -M Y R E L D A E R A Q I N K A L -
uvig_190593_CDS_0029 M D E L R I T H L G (130)
G
AcrIC3 E --------G
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;