3D Structure for uvig_188596_CDS_0050 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 96.19 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_188596_CDS_0050 1 AcrIE6 0.70 View Alignment uvig_188596_CDS_0050 M E -E K R L Y N L A C D M ---L L M K W -G -N -E -H -D F L E K Y -P --------N D E I A K A R E E K L W (60)
M + + L+ + +++
AcrIE6 M N N D T E V L E Q Q I K A F E L L A D E L K -D -R -L -P T L E I L -S -P M Y T A V M V T Y D L I G K Q L A S R R
uvig_188596_CDS_0050 N E L I Q L K E E ----M K E -K ---K -F A (85)
ELI + EE
AcrIE6 A E L I E I L E E Q Y P G H A A D L S I K N L C P
uvig_188596_CDS_0050 2 AcrIIC4 0.57 View Alignment uvig_188596_CDS_0050 M -E -E K R L Y N --------L -----------A -C D ----M L L M K W G N E H D F L E K Y P N D ---(60)
M + ++ + + +DF
AcrIIC4 M K I T S S N F A T I A T S E N F A K L S V L P K N H R E P -I K -G L F K S A V E Q F S S A R D F F K N E N Y S K E L
uvig_188596_CDS_0050 --E I A K A R E E K L W N E L I Q L K E E M K E K K --F A (91)
K + L + +
AcrIIC4 A E K F N K E A V N E A V E K L Q K A I D L A E K Q G I Q -F
uvig_188596_CDS_0050 3 AcrIIA28 0.56 View Alignment uvig_188596_CDS_0050 M E -------E K R L Y N L -A ---C D M L L M K W G -N E H -D F L -E -K -Y -P -------N D ----E (60)
M L N L +
AcrIIA28 M K T I F T K K Q T E E L L N D I S I E K Q K E L F N S M H D -F R S Q H -A -K -E -A -R I P G W S D K Y N K L E K
uvig_188596_CDS_0050 I A K A R E E K L W N E -L I Q -L K E E ------M K E K K --F A (96)
E + L K
AcrIIA28 K M L S D F E E V T G I K Y D -T L E S -E L I W D N L S N K F L Y N S
uvig_188596_CDS_0050 4 AcrIE1 0.55 View Alignment uvig_188596_CDS_0050 M --E ----E K -R -L Y N -------L -------A C D M ----L -L -M K W G ----N -E -H D F L E (60)
M A + +
AcrIE1 M E K K L S D A Q -V -A -L V A A W R K Y P D L R E S L E E A A S I L S L I -V -F -Q A E T L S D -Q -A N E L A N
uvig_188596_CDS_0050 K Y P --N D ----E I A K A R E E K L W N E L I Q L K E E -------M K E -K ---K F A (109)
E A + + + E
AcrIE1 Y I R R Q -G L E E A E G A C R N I D I M R A K W V E V C G E V N Q H G I R V Y G D A I D R D V D
uvig_188596_CDS_0050 5 AcrIF23 0.54 View Alignment uvig_188596_CDS_0050 M -E E K R L Y N -------L A C D --------M L L ---------------M -K W -G --------(60)
M +
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G Q W I D L E T G I A Y -D P S Y N Y A A N T R R A S L S P R -G I D A R A V A K T
uvig_188596_CDS_0050 ----------N E ----H D F L E K Y P ------------N D ------------------E -I - (120)
AcrIF23 F G G R A L T G T A R Q K E W A E K I R A E K V Q Q M N Q D Q A E M A C D -P S G L L T A A K F W I E N R N D S A Q -E
uvig_188596_CDS_0050 A K A -R E E -K -L W N E L I Q ----L K E E ------------M -K E K K ---F A (168)
+ A L+ +K
AcrIF23 I -A G F V -M -Q -Q K A L L A Q H R S A K A A G Q A D K V A K I A A E -Y N A L T A R W G F
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;