3D Structure for uvig_186345_CDS_0021 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 80.77 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_186345_CDS_0021 1 AcrIIA21 0.86 View Alignment uvig_186345_CDS_0021 M S ----E Q Y F ---N --T E I A G D L G I S T A I V Y Q F I V D A C K A N A T E W T Q C H D G R F W V E F P Q S (60)
M + L + ++VY + D + DG + F
AcrIIA21 M D Y D N E N Y L I P K I L L Q D D F Y S S L S A K D I L V Y A V L K D R Q I E A L E K G W I D T D G S I Y L N F K L I
uvig_186345_CDS_0021 R F E E A F P Y M N P Q T V R S I L H K L Q R F G L I E S A C F D T Y -T K V -I K S Y A P V -P -D D R F N D L A (118)
F + +T + +L LIE D N+ +
AcrIIA21 E L A K M F -S C S R T T M I D V M Q R L E E V N L I E R E R V D V F Y G Y S L -P -----Y -K -T Y I N E -V
uvig_186345_CDS_0021 2 AcrIA3 0.52 View Alignment uvig_186345_CDS_0021 M S E Q Y F N T E I A G D -L -------G -I -S T A -I V Y -Q F I V D A C K A N A T E W T Q C H D G R F W V E -(60)
MS + + + F ++ + G
AcrIA3 M S F Y I M Y I K V K E -M S E Q K Q I S L R S -K Q -K E L -L Q R F -F E I A E V D -E ------N G -D L C I P
uvig_186345_CDS_0021 -F P Q S -R F E E -A F -P Y M N P Q T V R -S -I L H -K L Q -R -F G L I E S ----A C -F ---D T Y T K V I (120)
+S F LI + +
AcrIA3 L Y D S S G D L -T L -F K Q D S R ---K -Y -Q M Y -A Y F -R -I L R L I K K Q I F F I -K -V K K V --K R D K
uvig_186345_CDS_0021 K S Y A P ---V -P D D R F N D -L -A (141)
K D L
AcrIA3 K F L C -M H S -N V I D Q V K S V L E S
uvig_186345_CDS_0021 3 AcrIE5 0.43 View Alignment uvig_186345_CDS_0021 M S E Q Y F N T E I A G D L G I S T A I V Y Q F I V D A C K A N A T E W T Q C H D G R F W V E F P Q S R F E E A F P Y M (60)
MS + + +
AcrIE5 M S -N -D R N G -------I I N Q I I D Y T ------------------------G ---------T
uvig_186345_CDS_0021 N P Q T V R S I L H K L Q R F G L I E S A C F D T Y -T K V I K S Y A P V ---P D D R F -N D -L A (111)
+ I L I + +
AcrIE5 D R D H A E R I Y E E L R A D D R I Y F D D ---S V G L D R Q G L L I R E D V D L M A V A -A E I E
uvig_186345_CDS_0021 4 AcrVA2 0.41 View Alignment uvig_186345_CDS_0021 M S -E ---Q Y F N T E I A G D ---L ---------------------------------------(60)
M + +
AcrVA2 M H H T I A R M N A F N K A F A N A K D C Y K K M Q A W H L L N K P K H A F F P M Q N T P A L D N G L A A L Y E L R G G
uvig_186345_CDS_0021 ------------------------------------------------------------ (120)
AcrVA2 K E D A H I L S I L S R L Y L Y G A W R N T L G I Y Q L D E E I I K D C K E L P D D T P T S I F L N L P D W C V Y V D I
uvig_186345_CDS_0021 ----------------------------G -I -S T A I V Y Q F I V D A C K A N A T E W T Q C H D G R F (180)
+ V F+VD +
AcrVA2 S S A Q I A T F D D G V A K H I K G F W A I Y D I V E M N G -I -N H D V L D F V V D T D ---T D -D N V -Y V P Q P
uvig_186345_CDS_0021 W -V E F P Q S R F E E A -F ---P Y -M -N P Q T V R S I L H K L Q R F G L I E S A C F --D T Y T K V I K S ---(240)
+ + T ++++ L L + TY + S
AcrVA2 -F I L S S G Q S V A -E V L D Y G A -S L F D D D T S N T L I K G L L P Y L L W L C V A E P D I T Y K G L P V S R E E
uvig_186345_CDS_0021 -Y A -P -----------------------V ------------------------------- (300)
AcrVA2 L T -R -P K H S I N K K T G A F V T P S E P F I Y Q I G E R L G S E V R R Y Q S I I D G E Q K R N R P H T K R P H I R
uvig_186345_CDS_0021 ------------------P ---D D -R --F N D --L A (335)
AcrVA2 R G H W H G Y W Q G T G Q A K E F R V R W Q P A V F V N S G R V S -S
uvig_186345_CDS_0021 5 AcrIIA6 0.40 View Alignment uvig_186345_CDS_0021 M S -E Q Y F ---N T E I A G D -L ---------------------------------G -I S T A I V (60)
M E G + +
AcrIIA6 M K I N D D I K E L I L E Y M S R Y -F K F E N D F Y K L P G I K F T D A N W Q K F K N G G T D I E K M G A A R V N A M
uvig_186345_CDS_0021 Y Q F I V D ----A -C -K -A N A T E W T Q C -H -D G R F W -V E F P Q S R F E E A F P Y M N -P Q T V R S I L H (120)
+ D T+ P Q ++L+
AcrIIA6 L D C L F D D F E L -A -M -I -G K A -Q T N Y Y -N -D N S L K M N M P F Y ---T Y Y D M F K K -Q ---Q L L K
uvig_186345_CDS_0021 K L Q R F G L -I E S A C --------F D T Y T K V I K S Y A P -----------------V --------(180)
L + + +
AcrIIA6 W L K N N R D D V I G G T G R M Y T A S G N Y I --A N A Y L E V A L E S S S L G S G S Y M L Q M R F -K D Y S K G Q E
uvig_186345_CDS_0021 --------P D D -R F N D ----L A (202)
+
AcrIIA6 P I P S G R Q N R L -E W I E N N L E N I R
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;