3D Structure for uvig_182824_CDS_0010 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 96.48 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_182824_CDS_0010 1 AcrIIA7 0.78 View Alignment uvig_182824_CDS_0010 M D F S E A L K R V K A G K K I F R L G W N G K G M F V V H -Q K G -Y P D G I -P --------C N -H -Q T A L A (60)
M F AL +K G+ + R GWNGKGMF+ P + ++
AcrIIA7 M T F G Q A L E S L K R G H L V A R K G W N G K G M F I F M R P E D S L P T N M I V N Q V K S L P E -S F -K R W V A N
uvig_182824_CDS_0010 W G M -N E G D L F K C N P Y L Q I K N A Q G -S H S M W V P S I D D I L A N D W E D I R (105)
+E D K + YL K A G + W+ S D LANDW +
AcrIIA7 N H G D S E T D R I K F T A Y L C M K A A D G T I V N G W L A S Q T D M L A N D W V I V E
uvig_182824_CDS_0010 2 AcrIIA4 0.55 View Alignment uvig_182824_CDS_0010 M D F S E A L K R V K A -G K K I F R L G W N G K G M F V V H Q K G Y P D -G I P C N H -Q T --A L A W G M N E G D L (60)
M +++++ +K + G + N+G
AcrIIA4 M N I N D L I R E I K N K D Y T V K L S G T D S ------------N S --I T --Q --L I --I R V N N D G N E
uvig_182824_CDS_0010 F K C --N P Y -L Q I K N A ----Q G S H S M W V P ----S I D D I L A -N D -W E D I R (108)
+ + + D ++
AcrIIA4 Y V I S E S E N E S I V E K F I S A F K N G W N Q E Y E D E E E F Y N D M Q -T I T L K S E L N
uvig_182824_CDS_0010 3 AcrIF18 0.52 View Alignment uvig_182824_CDS_0010 M D F S E A L K R V K A G K K I F R L G W N -G K G M F V V H Q K G Y P D G I P C N H Q T A L A W G M N E G D L F -K -(60)
M + KA I + W G+ F
AcrIF18 M T T --I ----K A A Y -I S K D Q N W N D G -T --------T -T ---------Y W F D V N G E T F G V V
uvig_182824_CDS_0010 -C N P Y -L -Q I K N A Q G S H -S M W V P -S I D D I L A N D W E D -I -R (100)
+ G + I
AcrIF18 H G G E S W N A K V V D C D G A P S D Q Y T V D Q F N -I T E D M ---I -A E
uvig_182824_CDS_0010 4 AcrIIA12 0.51 View Alignment uvig_182824_CDS_0010 M D -F ---S -E A L ---K R V K -A -G K K I F R L G W -N -G -K G M F V V H Q K G Y P D G I P C N H Q T A L A (60)
M +++ K +K + C +
AcrIIA12 M S K T M Y K -N D V I E L I K N A K T -N N E E L L F T S V E R N T R E A A -------T -Q Y F R C P E K H V S D
uvig_182824_CDS_0010 W G M N E G D L F K C N P Y L Q I K N A Q G S H S M W -V P S I D D I L A N D W E D I R (104)
G G+ F I ++
AcrIIA12 A G V Y Y G E D F E F D G F E -I F E --D D L I Y T R S -Y D ---K E ----E L N
uvig_182824_CDS_0010 5 AcrIIA24 0.49 View Alignment uvig_182824_CDS_0010 M -D F S E A L K R V K A G K K I F R -L G W N -G K G M -F V V H Q K G Y P D G I P C N H -Q -T A L A W G M N E G D (60)
M + +LK +K + G
AcrIIA24 M K K A Q Q L L K E I K T N N V S Y A I -M -D E -D N E I -Y C N K E -T N -------N -I -M D I Y G Y D N --
uvig_182824_CDS_0010 L F K C N P Y L Q I -K N -A Q -G S -H S --M W ----V ----P ----S I D D I L A N D ----W -E -D --(120)
+ + G+ S D I +D
AcrIIA24 --E N G H F Y G V Y -G D V V D G Q I D S R Y F S D D A I -L N A I D K L L F L G D P I K R T D L P S D -A -D -F K
uvig_182824_CDS_0010 ----I -R (127)
AcrIIA24 R T F F F E E
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;