3D Structure for uvig_181990_CDS_0055 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 93.80 ;
Download
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_181990_CDS_0055 1 AcrIE6 0.76 View Alignment uvig_181990_CDS_0055 M M D K Q A L L Q Y W A G E L -I A V -K M E L E K I S Y L L Q S ---G V K P T R E -I E -R -H L D N M L D R K K H (60)
M + +L + ++ +++ L + + R+
AcrIE6 M N N D T E V L E Q Q I K A F E -L L A D E L K D R L P T -L E I L S P M Y T A V M V T Y -D -L I G K Q L A S R R A E
uvig_181990_CDS_0055 L E M L I ----E E V ----R --K Q --K (84)
L ++ K+
AcrIE6 L I E I L E E Q Y P G H A A D L -S I K N L C P
uvig_181990_CDS_0055 2 AcrIIC4 0.63 View Alignment uvig_181990_CDS_0055 M M -D K Q A --L L Q ----------------Y -W A -G E L I A V K M E L E K I S Y L L Q S G V K P T R E I (60)
M + + G + + + +
AcrIIC4 M K I T S S N F A T I A T S E N F A K L S V L P K N H R E P I -K G L F K S A V E Q F S S A R D F F K N E N Y S K E L A
uvig_181990_CDS_0055 E R H L D -N M -L D R -K K H L E M L I E E V R ---K Q K (91)
E+ + +L +I+ + Q
AcrIIC4 E K F N K E -A V N E -A V E K L Q K A I D L A E K Q G I Q F
uvig_181990_CDS_0055 3 AcrIE1 0.61 View Alignment uvig_181990_CDS_0055 M M ----D K Q A L L -Q ----------Y -------W A G -E -L ----I -A V K M E L E K I S Y L L Q S (60)
M D Q++L + + + + +
AcrIE1 M E K K L S D A Q V A L V A A W R K Y P D L R E -S L E E A A S I L S L -I -V F Q A -E T L S D Q A N E L A N Y I R R
uvig_181990_CDS_0055 -G V K P T R E I E R H L D N M L D R K K H L E ----M -L I ----E E V R K -Q -K (105)
G+ + R +D M + + ++
AcrIE1 Q G L E E A E G A C R N I D I M R A K W V E V C G E V N -Q H G I R V Y G D A I D R D V D
uvig_181990_CDS_0055 4 AcrIF23 0.57 View Alignment uvig_181990_CDS_0055 M M D K Q A ------L -L Q --------------------------------------------(60)
M Q + +
AcrIF23 M T N F Q T W L D S A D I P V -Q Q N G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T F
uvig_181990_CDS_0055 -----------------------Y -W ----A G E L I A V K M E -L -E -K I S Y L L Q S G V K P T R E (120)
E + + + + E
AcrIF23 G G R A L T G T A R Q K E W A E K I R A E K V Q Q -M N Q D Q A E M A C D P S G L -L -T A A K F W I E N R N D S A Q E
uvig_181990_CDS_0055 I E R H L D N M L D R -K -K H -L E ----M --------L -I ----E E V R K Q --K (168)
I + + +
AcrIF23 I A G F V M Q Q K A -L -L A -Q H -R S A K A A G Q A D K V A K I -A A E Y N A L T A R W G F
uvig_181990_CDS_0055 5 AcrIC3 0.53 View Alignment uvig_181990_CDS_0055 M M -D K Q A -L L --Q ------------------Y W A -G E L I -A V ----K -M -E L E ---K -I S (60)
M + E + I
AcrIC3 M S I Q V T S T N G R T -V N L E I E L G S V V A S S G Q V K F M -A D K T D R G -L E S R -F -L V P E A G N R R I -
uvig_181990_CDS_0055 -Y --L L -Q S G ----V K P T R E I E R H L D N M L D R K K H -L E M L I E E V R K Q --K (109)
L E+ ++ + + L+ + K
AcrIC3 E -V A L -T G R D L E A A N A L F S E L A A S V E A T N E M Y R -E L D A E R A Q I N K A L E G
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;