3D Structure for uvig_181458_CDS_0001 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 86.93 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_181458_CDS_0001 1 AcrIE6 0.71 View Alignment uvig_181458_CDS_0001 M S K Q R -K A I T L I K K Q Q D M Y Y K M R E N L K D T L G V ---K N K R Y K K I R L K I N E E ----I Q V L D Y (60)
M+ + + IK ++ L TL + I L
AcrIE6 M N N D T E V L E Q Q I K A F E L L A D E L K D R L -P T L E I L S P M Y T A V M V T Y D L I G K Q L A S R R A E L I E
uvig_181458_CDS_0001 I L M K I G -G ----T N D -E I -Y (80)
IL G + +
AcrIE6 I L E E Q Y P G H A A D L S I K N L C P
uvig_181458_CDS_0001 2 AcrIIC4 0.64 View Alignment uvig_181458_CDS_0001 M S -K Q --R K A I T -------------L -------I -K -K -Q -Q D M -Y Y K M R E N L K D T L G V K (60)
M + I + + R+ K
AcrIIC4 M K I T S S N F A T I A T S E N F A K L S V L P K N H R E P I K G L F -K -S -A V E -Q F S S A R D F F K N E N -Y S
uvig_181458_CDS_0001 N K R Y -K -K I R -L K I N E E I Q V L D Y I L M K I G G T N D E I Y (96)
+NE + L ++ +
AcrIIC4 K E L A E -K -F N K E A V N E A V E K L Q K A I D L -A E K Q G I Q F
uvig_181458_CDS_0001 3 AcrIE1 0.59 View Alignment uvig_181458_CDS_0001 M -S ---K Q R K A I ----T --------L ----I ----K ----K Q ----Q -D -M -Y -Y -K -M -(60)
M A+ + Q
AcrIE1 M E K K L S D A Q V A L V A A W -R K Y P D L R E -S L E E A A S I L -S L I V F Q A E T L -S -D -Q -A -N -E -L
uvig_181458_CDS_0001 R E N L -K D T L G V K N K R Y K K I R L K I N E E I Q V -L D ---Y -I L M K I G -G T N D E -I Y (112)
+ + + ++ D +
AcrIE1 A N Y -I R R Q G L E E A E G A C R N I D I M R A K W V E V C G E V N -Q H G I R V Y G D A I D R D V D
uvig_181458_CDS_0001 4 AcrIF23 0.55 View Alignment uvig_181458_CDS_0001 M S K Q ---R -K A I ---T --------L ----I K -----------------------------(60)
M+ A L +
AcrIF23 M T N F Q T W L D S A D I P V -Q Q N G Q W I D L E T G I A -Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T
uvig_181458_CDS_0001 ------K Q Q D -----------M -Y Y K M R E N L K D T L ---G ----V K -N K R Y K -K -I -R L K I (120)
+ +
AcrIF23 F G G R A L T G T A R Q K E W A E K I R A -E K V Q Q M N Q D Q A E M A C D P S G L L T A A K F -W I E -N -R -N D S
uvig_181458_CDS_0001 N E E I Q V L D Y I L M K I G -----------------------G -T N D E -I -Y (168)
EI +
AcrIF23 A Q E I A G F V M Q Q K A L -L A Q H R S A K A A G Q A D K V A K I A A E Y N A -L T A R W G F
uvig_181458_CDS_0001 5 AcrIIA28 0.55 View Alignment uvig_181458_CDS_0001 M S --K Q ----R K A I T -L -I K K Q Q D M Y Y K M R E N L K D T L ---G V ----K N K R Y K K I R L K I N E (60)
M + +++ Q + + + +Y K+ K
AcrIIA28 M K T I F T K K Q T E E L L N D -I S I E K Q K E L F N S M H D F R S Q H A K E A -R I P G W S D K Y N K L E K K M L S
uvig_181458_CDS_0001 E I Q V -L D Y ---I L -M K --I -G -G T N D -E --I Y (92)
+ L I +
AcrIIA28 D F E E V T G I K Y D T L E S -E L I W -D N L S N K F L Y N S
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;