3D Structure for uvig_181331_CDS_0038 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold with pLDDT = 88.13 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see: Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_181331_CDS_0038 1 AcrIE1 0.84 View Alignment uvig_181331_CDS_0038 M -S ---K -Q K E A I ----T --------L --------I -K ----K ----Q -R -D -M -H -I -K (60)
M A+
AcrIE1 M E K K L S D A -Q V A L V A A W -R K Y P D L R E -S L E E A A S I -L -S L I V F Q A E T -L -S -D -Q -A -N -
uvig_181331_CDS_0038 -M -R E N L K D T L G V E N K R Y K K I R L K I N -E E I Q V -L D ---Y -I L M K I G G -T -N D E A -K (116)
++ + E + ++ G D
AcrIE1 E -L A N Y I R R Q G L E E A E G A C R N I D I M R A -K W V E V C G E V N -Q H G I R V Y G D -A I D R D V D
uvig_181331_CDS_0038 2 AcrIE6 0.84 View Alignment uvig_181331_CDS_0038 M S K Q K E -A I T L I K -K Q R D M H I K M R E N -L K D T L G V ---E N K R Y K K I R L K I N E E ----I Q V L (60)
M+ E + ++ L TL + I L
AcrIE6 M N N D T E V -L E Q Q I K A F E L L A D E L K D -R L -P T L E I L S P M Y T A V M V T Y D L I G K Q L A S R R A E L
uvig_181331_CDS_0038 D Y I L M K I G -G T N -D --E --A -K (82)
IL G D +
AcrIE6 I E I L E E Q Y P G H A A D L S I K N L C P
uvig_181331_CDS_0038 3 AcrIF15 0.83 View Alignment uvig_181331_CDS_0038 M S K Q K E A I T L I K K Q R D M H I K M R E N L K D T -L ---G V E N K R Y K K I R L K I N E E I Q V L D Y I L M K (60)
M+ A + + M E+ + G E + I + +L K
AcrIF15 M T T I T I A Y E V S N D K V E T I K T M V E S Q Q I H N V N F N G E E F T I E R G D F T S I D K D E A E H V K L L N K
uvig_181331_CDS_0038 I G G T N D E A K (69)
I
AcrIF15 I Q D I I H G Y S
uvig_181331_CDS_0038 4 AcrIIA34 0.82 View Alignment uvig_181331_CDS_0038 M S K Q ----K E A I -T ----------L I K K Q R D M H I K M R E N -L -K D T L G V E N K R Y K K I R L K I (60)
M K + I + E D L Y +
AcrIIA34 M K N I A N E I K T I -R Y A F E D G R S T Q K S I M R K I K A L T D Q F E -T -M -D D L I D S L N S Y A D T H Y T W
uvig_181331_CDS_0038 N E E I Q V L D Y I L M K I G ----------------------G ---------------------T (120)
L I+
AcrIIA34 A I T Y F Q L A R I I I S F Q A S N N T T S E K K I D L Q S G P I E V N G K L K I R V T V D E F M A D L A N W E H L E D
uvig_181331_CDS_0038 --N D --E A K (129)
E+
AcrIIA34 I K K L A K E L A
uvig_181331_CDS_0038 5 AcrIC4 0.80 View Alignment uvig_181331_CDS_0038 M S K Q K E A I T L I K K Q R D M H I K M R E N L K D T L G V E N K R Y K K I R L K I N E E I Q V -L D Y I L M K I G G (60)
M +K + + + + D K
AcrIC4 M -D N K I T P A ----D E E K I R E W L N ---C E E A S V D N D -G D V W V A V P M T G H W L S D E Q K A K Y I E
uvig_181331_CDS_0038 T N D E A K (66)
+
AcrIC4 W R G D E T
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;