3D Structure for uvig_181331_CDS_0038 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 88.13 ;
Download
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_181331_CDS_0038 1 AcrIE6 0.72 View Alignment uvig_181331_CDS_0038 M S K Q K E -A I T L I K -K Q R D M H I K M R E N -L K D T L G V ---E N K R Y K K I R L K I N E E ----I Q V L (60)
M+ E + ++ L TL + I L
AcrIE6 M N N D T E V -L E Q Q I K A F E L L A D E L K D -R L -P T L E I L S P M Y T A V M V T Y D L I G K Q L A S R R A E L
uvig_181331_CDS_0038 D Y I L M K I G -G T N -D --E --A -K (82)
IL G D +
AcrIE6 I E I L E E Q Y P G H A A D L S I K N L C P
uvig_181331_CDS_0038 2 AcrIIC4 0.65 View Alignment uvig_181331_CDS_0038 M S -K Q K E A I T -------------------L ----I -K -K -Q -R D -M -H I K M R E N L K D T L G (60)
M + +T + R+ K
AcrIIC4 M K I T S S N F A T I A T S E N F A K L S V L P K N H R E -P I K G L F -K -S -A V -E -Q F S S A R D F F K N E N Y
uvig_181331_CDS_0038 V E N K R Y -K -K I R -L K I N E E I Q V L D Y I L M K I G G T N D -E A K (99)
+NE + L ++ +
AcrIIC4 S K -E L A E -K -F N K E A V N E A V E K L Q K A I D L -A E K Q -G I Q F
uvig_181331_CDS_0038 3 AcrIE1 0.62 View Alignment uvig_181331_CDS_0038 M -S ---K -Q K E A I ----T --------L --------I -K ----K ----Q -R -D -M -H -I -K (60)
M A+
AcrIE1 M E K K L S D A -Q V A L V A A W -R K Y P D L R E -S L E E A A S I -L -S L I V F Q A E T -L -S -D -Q -A -N -
uvig_181331_CDS_0038 -M -R E N L K D T L G V E N K R Y K K I R L K I N -E E I Q V -L D ---Y -I L M K I G G -T -N D E A -K (116)
++ + E + ++ G D
AcrIE1 E -L A N Y I R R Q G L E E A E G A C R N I D I M R A -K W V E V C G E V N -Q H G I R V Y G D -A I D R D V D
uvig_181331_CDS_0038 4 AcrIF23 0.55 View Alignment uvig_181331_CDS_0038 M S K Q ---K -E -A I ---T -------------------------------------------(60)
M+ A +
AcrIF23 M T N F Q T W L D -S A D I P V Q Q N G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T F
uvig_181331_CDS_0038 -------------L I K -K Q R D -M H I K M R E N L K D T L ----G --------V --E N K -R Y K -K (120)
+ K R ++ +
AcrIF23 G G R A L T G T A R Q K E W A -E K I R -A E K V Q Q M N Q D Q A E M A C D P S G L L T A A K F W I E N R N D S A -Q -
uvig_181331_CDS_0038 I R L K I N E E ----I -Q V -L -D -Y -I L --------M K I G -G T N D ---E --A -K (171)
+ + KI
AcrIF23 E I A G F V M Q Q K A L -L A -Q -H -R -S A K A A G Q A D K V A K I -A A E Y N A L T -A R W G F
uvig_181331_CDS_0038 5 AcrIF25 0.55 View Alignment uvig_181331_CDS_0038 M S -------------------------------------------K Q K E A ---I T ----L (60)
M K + +
AcrIF25 M D N D D K K P D A L I H L R V P A E V K G R W V K E S R L E G M K L T D W I T G R V E A K A L S I A E V L E E A A A M
uvig_181331_CDS_0038 I -K -------------------K Q ----R D --------------------M H I K M R E -N L (120)
+
AcrIF25 -A -R S L E D S P I F Y R N K L C A D G I V T I Q Q Q A -A R F S A A T D D A T R L D A A L W A R E G Y Q L L S S -G
uvig_181331_CDS_0038 -K D T L -G -V --------E N -K R Y -K -K -I R L -K I N E E I Q V L D Y I L M K I G G T N D E -A K (177)
D+ E+ ++ +GG E +
AcrIF25 L P D S -Y -S -G A V P N E G R T G W -V T A -S -Q M A -R L F G G E A L W I E R C Q Q E L G G A G K E D G R
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;