3D Structure for uvig_180338_CDS_0096 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 91.31 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_180338_CDS_0096 1 AcrIE6 0.71 View Alignment uvig_180338_CDS_0096 M N K D I E L L E K ---T N -H -E -L -L -K -L L Y E L R Q Y G N -G ---A ----E T E T -I H A K I C E V R (60)
MN D E+LE L L + + I + R
AcrIE6 M N N D T E V L E Q Q I K A F E -L -L -A -D -E L K D R L P T L E I L S P M Y T A V M V T Y D -L I G K Q L A S R R
uvig_180338_CDS_0096 N E T F R M ----I ----E -E -L ----K -R (87)
E +
AcrIE6 A E L I E I L E E Q Y P G H A -A D L S I K N L -C P
uvig_180338_CDS_0096 2 AcrIIC4 0.64 View Alignment uvig_180338_CDS_0096 M N -K --D I E L L E K ----------------T ----N H E L L K L L Y E L R Q Y G ---N --G ----(60)
M + + ++ +R N
AcrIIC4 M K I T S S N F A T I A T S E N F A K L S V L P K N H R E P I K G L F K S A V E Q F S S A R D F F K N E N Y S K E L A E
uvig_180338_CDS_0096 A E T E T I H A K I C E V R N E T F R M I E E L -K -R (88)
+ + + E + +E
AcrIIC4 K F N K E A V N E A V E K L Q K A I D L A E K Q G I Q F
uvig_180338_CDS_0096 3 AcrIE1 0.60 View Alignment uvig_180338_CDS_0096 M -N ---K -D I E L L E K --------------T --------N --------H -E -L -L -K -L L Y (60)
M +L L+
AcrIE1 M E K K L S -D A Q V A L V A A W R K Y P D L R E S L E E -A A S I L S L I -V F Q A E T L S -D -Q -A -N -E L A N
uvig_180338_CDS_0096 E L R Q Y G N G A ---E T E T ----I H ---A K -I C E -V -R -N -E -T -F R -M I E E L ----K -R (117)
+R + + C ++
AcrIE1 Y I R R -Q G L E E A E G A C R N I D I M R A K W V E V -C G E -V -N -Q -H -G I -R V Y G D A I D R D -V D
uvig_180338_CDS_0096 4 AcrIIA28 0.56 View Alignment uvig_180338_CDS_0096 M -N ----K D I E L -L E K ----T -N H E L L K L L -Y E L -R Q Y ---G --------N G ----A -E T (60)
M + K E L ++EL Q
AcrIIA28 M K T I F T K K Q T E E L L N D I S I E -K Q K E L F N S M H D -F R S Q H A K E A R I P G W S D K Y N K L E K -K M -
uvig_180338_CDS_0096 -E -T -I -H -A K I C E V R N E ---T --F R -M -I E E L -K -R (97)
+
AcrIIA28 L -S -D -F -E E V T G I K Y D T L E S E L I W D N -L S N K F L Y N S
uvig_180338_CDS_0096 5 AcrIF25 0.55 View Alignment uvig_180338_CDS_0096 M N -K ---D --------I E L -L E -K -----------------------T ------------(60)
M
AcrIF25 M D N D D K K P D A L I H L R V P A E V -K G -R W V K E S R L E G M K L T D W I T G R V E A -K A L S I A E V L E E A
uvig_180338_CDS_0096 ------------------------------------------------N H E L L K L L -Y E L (120)
+E LL
AcrIF25 A A M A R S L E D S P I F Y R N K L C A D G I V T I Q Q Q A A R F S A A T D D A T R L D A A L W A R E G Y Q L L S S G -
uvig_180338_CDS_0096 -R Q -Y -G -----N -----G -A ----E T E T I H A K I C E V R N E T F R M I -E E --L -K R (174)
G + + R
AcrIF25 L P -D -S -Y S G A V P N E G R T G W -V T A S Q M A R L F G G E A L W I E R C Q Q E L G G A G K E D G R
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;