3D Structure for uvig_180338_CDS_0093 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 91.25 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_180338_CDS_0093 1 AcrIE6 0.73 View Alignment uvig_180338_CDS_0093 M K E R L ---A R L M E ----R -R -E E -I W D N M S T N R ---M ---S Y L ----L D M D D Y K A V T A E I (60)
M + + D T L AE+
AcrIE6 M N N D T E V L E Q Q I K A F E L -L -A D -E L K D R L P T L E I L S P M Y T A V M V T Y D L I G K Q L A S R R A E L
uvig_180338_CDS_0093 K Y -V R -R M -L ---R N A --R -K --A (84)
AcrIE6 I E I -L E E -Q Y P G H A A D L S I K N L C P
uvig_180338_CDS_0093 2 AcrIIC4 0.56 View Alignment uvig_180338_CDS_0093 M K -E --R L A R L M ------------E -----------R R E E ----I -W -D N M -S T -N -R -M (60)
MK A + E D
AcrIIC4 M K I T S S N F A T I A T S E N F A K L S V L P K N H R E P I K G L F K S A V E Q F S S -A -R D F -F K -N -E -N Y
uvig_180338_CDS_0093 S ----Y L L D M D D Y K A V T A E I K Y V R R M L R N A -R K -A (95)
S + + + + +
AcrIIC4 S K E L A E K F N K E A V N E A V E K L Q K A I D L A E K -Q G I Q F
uvig_180338_CDS_0093 3 AcrIF23 0.54 View Alignment uvig_180338_CDS_0093 M K E R ----L -A -R -L M E -------------------------------------------(60)
M +
AcrIF23 M T -N F Q T W -L -D -S A D -I P V Q Q N G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V
uvig_180338_CDS_0093 --------------------R -R ----E E I W D N -M S T ----N -R -------M -------S (120)
+ + +
AcrIF23 A K T F G G R A L T G T A R Q K E W A E K I -R A E K V Q Q M N Q D -Q A E M A C -D P S G L L T A A K F W I E N R N D
uvig_180338_CDS_0093 Y ----L -L -D -M D D Y K A V T A E I K ------------Y V R R M L R N A R K ---A (170)
KA+ A + + +
AcrIF23 S A Q E I -A -G -F V M Q Q K A L L A Q H R S A K A A G Q A D K V A K I A A E Y N A L T A R W G F
uvig_180338_CDS_0093 4 AcrIE1 0.52 View Alignment uvig_180338_CDS_0093 M K ---E R -L -A -R -L -M -----------E ----R R E E ----I W D N M S T -------N -R --(60)
M I +
AcrIE1 M E K K L S D A -Q -V -A -L -V A A W R K Y P D L R -E S L E E A A S I L S L I V F Q A E -T L S D Q A N E L -A N
uvig_180338_CDS_0093 --M -S -----------Y L -L -D -M D D Y K A V T A E I K Y V R -R -M -L R N A R -K --A (113)
+ V E+ A +
AcrIE1 Y I R R Q G L E E A E G A C R N I -D -I -M R A K W V E V C G E V N Q H G I -R -V Y G D A I D R D V D
uvig_180338_CDS_0093 5 AcrIF2-IC2 0.50 View Alignment uvig_180338_CDS_0093 M -K E R L ---A R L M E R R E E ----I W D N -M --S T ------N ----------R --M S ------(60)
M + A +
AcrIF2-IC2 M A T K T A Q M I A Q Q H K D T V A A C E A -A E A I A I A --K D Q V W D -G E G Y T K Y T F D -D N S V L I Q S G T
uvig_180338_CDS_0093 --Y L ---L D M D D Y K A V T A E I K ---------Y -V -R -R -M -L R N A R K A (107)
Y+ D D K + L ++
AcrIF2-IC2 T Q Y A M D A D D A D S I K G Y A D W L D D E A R S A E A S -E -I -E -R -L L E S V E E E
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;