3D Structure for uvig_179030_CDS_0062 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 87.71 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_179030_CDS_0062 1 AcrIIA27 0.76 View Alignment uvig_179030_CDS_0062 M K V W E V A V E L -N --M --D --S S N V V K I E I E A S T E N K A R V N A E I K A R K K Y N T --N F V K S -V (60)
MK + ++V + +EA + A A + +
AcrIIA27 M K T F N I I V S E S A N L K E H S S E L V D N I I Y K V E A K N R R E A F K K A R E E Y -S F S S K W K F N M R D L T
uvig_179030_CDS_0062 N V -K Y ----------L G I Y K E S (82)
E
AcrIIA27 A -I D -N T H R R A W G R R Y L R V E E A
uvig_179030_CDS_0062 2 AcrIE2 0.66 View Alignment uvig_179030_CDS_0062 M K V W E V A V E L N -M D --S -S N V V K I E -I E -A -S -T E N K A R V N A E I K A R K K Y N T N F V K S V N V (60)
M + D + A+ A + +
AcrIE2 M N T Y L I D -P R K N N D N S G E R F ---T -V -D A -V -D I T A A A K S A A Q Q I L G E E F E G L V Y R E T G E
uvig_179030_CDS_0062 K -Y L G I Y ---------------K --------E S (93)
G E
AcrIE2 S N G S G M F Q A Y H H L H G T N R T E T T -V G Y P F H V M E L
uvig_179030_CDS_0062 3 AcrIC9 0.58 View Alignment uvig_179030_CDS_0062 M K ---V -W E -V A V E L N M D S S N V V K I E I E A S T E N K A R V N A E I K A R K K Y N T N F -V K S V N -V K (60)
M + + S+++ T+ + + + + +
AcrIC9 M E T K M T S F Y K -I T A -Y -N -S Q A L Y F W ---G T D A D V D R Y -V D W L N R D R E I -N V -Y A A E A I P
uvig_179030_CDS_0062 --Y L G I Y ---------K ----------E -S (90)
Y
AcrIC9 E A E W A Q Y E G R D D V L S G -E E C G W D D F M S A E A
uvig_179030_CDS_0062 4 AcrIF5 0.57 View Alignment uvig_179030_CDS_0062 M K -V W -E V A V E L N M D ----------S -S N -V V K I E I E -A S T E N K A R V N A E I K A R K K Y N T N (60)
M + E V + S A + A A
AcrIF5 M S R P T V V T V T E T P R N P G S Y E V N V E R D G --K M V V G R A R A G S D P G A A A A K A M Q M A M E W G ---
uvig_179030_CDS_0062 F V K S V ----N -V K -Y -L G I Y ---K --E S (88)
+ L
AcrIF5 S -P N Y V I L G -S -N K -V L A F I P E Q L R V K M
uvig_179030_CDS_0062 5 AcrIF9 0.57 View Alignment uvig_179030_CDS_0062 M K V W -E V A V E L N M D -S S N V V K I E I E A S T E N K A R V N A E I K A R K K Y -N T N F V K S V --N V K Y L (60)
MK+ + ++ S IEA++ + A+ A V
AcrIF9 M K A A Y I I K E -V Q N I N S E R E G -T Q I E A T S L S Q A K R I A S K -E Q C --F -H G T V --M R I -E T V N
uvig_179030_CDS_0062 G I Y K ----------E -S (77)
G+ + +
AcrIF9 G L W L A Y K E D G K R W V D C Q
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;