3D Structure for uvig_178776_CDS_0003 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 94.18 ;
Download
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_178776_CDS_0003 1 AcrIE3 0.55 View Alignment uvig_178776_CDS_0003 M L S I -N E Q E -T ---L V -D D -L Q E V E T K L F -N L I E Q L -A S --D -D E L G K A W Y I V Y K R L Q K E (60)
M + L + E++ ++ L+ + D W ++ QK
AcrIE3 M K I T N D T T T Y E V A E L M G S -E A D E L D G R I M M G L L S R E C V V D T -D D L S E D Q W L A L I D E S Q K V
uvig_178776_CDS_0003 K A K E A K M -K S E N (72)
+ E
AcrIE3 R R E Q F E -S -D E A
uvig_178776_CDS_0003 2 AcrIE6 0.54 View Alignment uvig_178776_CDS_0003 M L S I N E ---Q E T L V D D L Q E V E T K L F N L I E Q L A S D ---D -E -L G K A W Y I V Y K R L Q K ---E K (60)
M N+ E+ + + L + +L + ++ K L E
AcrIE6 M N --N D T E V L E Q Q I K A F E L L A D E L K D R L P T L E I L S P M Y T -A V M V T Y D L I G K Q L A S R R A E L
uvig_178776_CDS_0003 A K -E ----A ---K M -K -S --E N (82)
+
AcrIE6 I E I L E E Q Y P G H A A D L S I K N L C P
uvig_178776_CDS_0003 3 AcrIIA19 0.50 View Alignment uvig_178776_CDS_0003 M L S -I N E Q E T -------L -----------V ---------D D L ------------------(60)
M + ET
AcrIIA19 M K L I V E V E E T N Y K N L V N Y T K L T N E S H N I L -V N R L I S E Y I T K P Y E L R L D L S E R Y S N R D L I E
uvig_178776_CDS_0003 -----Q E V E T K L F N L I E Q ----L A S ---D -D E L G K ----A -W Y I V Y K R L Q K -E -K -A --- (120)
E + + I + + V
AcrIIA19 F K F M L I E Y C K E A L Q D I K E L A N S -D E A Y E T D E A F E A V F R Q -L F E E V I S N P D -T -V -L K A F H
uvig_178776_CDS_0003 K E A K M K -S E N (130)
AcrIIA19 S Y T S F L E E N K
uvig_178776_CDS_0003 4 AcrVIA1_Lwa 0.49 View Alignment uvig_178776_CDS_0003 M L -S I N E Q E -----T -L -V ---D D L ----Q -E -V -E -T -K -L F N ---L I E Q L A S D D E L G K (60)
M D+ + + L K
AcrVIA1_Lwa M E K I K L I C L R I N N D E L -I T T D K D E W L K F I -K -R -H -R -G -K -V S S I E Q F N W K I P G N K L Q K
uvig_178776_CDS_0003 A W Y I V Y K R L Q K E K A K E A K M K S E N (83)
A L K K KE +
AcrVIA1_Lwa A L E Y S F D E L Y K F K Q K E N -R R E T D
uvig_178776_CDS_0003 5 AcrIF12 0.49 View Alignment uvig_178776_CDS_0003 M L --S I -N -E Q ----E -T -L -----------V ----------D D ---L ------------(60)
M+ + +
AcrIF12 M A Y E K -T -W -H R D Y A -A -E -S L K R A E T S R W T Q D A N L E W T Q L A L E C A Q V V H L A R Q V G E E L G
uvig_178776_CDS_0003 ----Q E V E T K L F ------------N -L I E Q -L A S ----D -------D E L G K A W Y I V Y K R L (120)
+ + ++ E V
AcrIF12 N E K I I G I A D T V L S T I E A H S Q A T Y R -R P C Y -K R I T T A Q T -H L L A V T L L E R F G S A R R V A N A -
uvig_178776_CDS_0003 -Q -K -E K A K E A K M K S E N (137)
E+
AcrIF12 V -W -Q L T D D E I D Q A -K A
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;