3D Structure for uvig_178278_CDS_0010 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 95.06 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_178278_CDS_0010 1 AcrVA5 0.72 View Alignment uvig_178278_CDS_0010 M L D L K L H V T L H G C S K A D I Y S H R G Q S V A V F K N V K V D R R K R R K G Y G N E L L T T L E N I A R V L G Y (60)
M + L G I + V V +R G G+ L+ + +AR +
AcrVA5 M -K I E L ---S G G Y I C Y S I --E --E D E V T I D M V E V T -T -K R Q G I G S Q L I D M V K D V A R E V -G
uvig_178278_CDS_0010 D S C V L W T D -----R -S A W M H D W Y K R R G Y E D Y A D Y D D P A S V W M W K S L (106)
L + ++Y E D M
AcrVA5 L P I G L Y A Y P Q D D S I S Q E D L I E F Y F S N D F E Y D P D D -V -D G R L M R W -S
uvig_178278_CDS_0010 2 AcrIB1 0.64 View Alignment uvig_178278_CDS_0010 M L D L K L H V T L ----------------H G -C S -K A -----D I -Y S H -R -----------G Q (60)
M K L + D
AcrIB1 M E -S K N L R K L L N E Y E E I D I N E M L K N F R -S -I K N -S G T K N D -I E I -F -L H E K A I K F E K S --
uvig_178278_CDS_0010 ----------------------------------------------------------S V (120)
S
AcrIB1 S I S S T Y V V F S E D N E I L G Y F T I A N R S L V I P K E N F G I L S K T Q Q K K L G N S A A I L K N G D L M T S S
uvig_178278_CDS_0010 A V F K N V K V D R -R -K R R K G Y G N ----E L L -T -T L E -N -I -A R -V -L G Y D S C V L W T D R S A W M (180)
+ ++ G + + L
AcrIB1 F L L G Q L G K N Y S D D I E N L I T G R E L L T F A -Y -D L F -L -K -I K -E -L I N V K Y I W L E C Q N E P K L
uvig_178278_CDS_0010 H D W Y K R R G Y E D Y A D Y D -D P A S V W M W K S -L (209)
+Y G + M
AcrIB1 I S F Y Q N F G F K M L E S L T S E E G L K V M I M E L K
uvig_178278_CDS_0010 3 AcrIF5 0.48 View Alignment uvig_178278_CDS_0010 M L D L K L H V T L H G C S K A D I Y S H R G Q --------S -V -A -V -F K N V K V D R R K -R -R -K G Y G N (60)
M VT +
AcrIF5 M S R P T -V V T -V ----T E T P R N -P G S Y E V N V E R -D -G -K -M V V G R A -----R -A -G -S D P G
uvig_178278_CDS_0010 E L L T T L E N I A R V L G Y D S C V L W T D R S A W M H D W Y K R R G Y E D Y A D Y D D P A S V W M W -K S L (116)
++ + + A G + V + +
AcrIF5 A A A A K A M Q M A M E W G S P N Y V -I L G S -N K V L A F I -------P ----E -Q L -R --V -K M
uvig_178278_CDS_0010 4 AcrIIC3 0.43 View Alignment uvig_178278_CDS_0010 M L D L K L H V T L H G C S K A D I Y S H R G Q S V A V F K N ---V K V -D -R R K R R ---K G Y G N ----E L -(60)
M +++F + R + N
AcrIIC3 M F ---------------------K R A I I F T S F N G F E K V -S R T E -K R R L A K I I N A R V S I -I
uvig_178278_CDS_0010 L -T -T L -E -N I A R ----V -L G Y D S C V L W T D -R S -------A W M H D W Y K R R G Y E D Y A D Y --(120)
G + S A + +
AcrIIC3 -D -E Y -L -R A K -D T N A S -L D G Q Y -R A F L F N D E S P A M T E F L A K L K A F A E S C T G I S I D A W E I
uvig_178278_CDS_0010 D -----D --P A --S ----V W M W K --S L (147)
+ + +
AcrIIC3 E E S E Y V R L P V E R R D F L A A A N G K E I F K I
uvig_178278_CDS_0010 5 AcrIIA28 0.43 View Alignment uvig_178278_CDS_0010 M L D L K L H V T L H G C S K A D I Y S H R G Q S V -A -V -F K N V K V D R R K R R K G Y G N E L L T T L E N I A R V (60)
M + N E L N +
AcrIIA28 M -K T I F T K K Q --------------T -E -E -L L -N D --I --------S I E K Q K E L F N S M H D
uvig_178278_CDS_0010 L G Y D S -C V L -W -T -D -------R S ----A W M H D W Y K R R G Y E D Y A D Y D ----D --P A S V W M (120)
+ + M Y + + +
AcrIIA28 F -R S -Q H A -K -E -A -R I P G W S D K Y N K L E K K M L S D F E E V T G I K Y D T L E S E L I W D N L S N K F L
uvig_178278_CDS_0010 W K S L (124)
+
AcrIIA28 -Y N S
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;