3D Structure for uvig_176988_CDS_0039 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 96.31 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_176988_CDS_0039 1 AcrIE1 0.70 View Alignment uvig_176988_CDS_0039 M -D ----T Q E Y Y R ----------A I I G I ----N -T A N -L -A A N ----L Q N V E I N E N -I -L (60)
M Q + ++ ++ N
AcrIE1 M E K K L S D A Q V A L V A A W R K Y P D L R E S L E E A A S I -L S L -I -V F Q -A E T L S D Q A N E L A N Y -I R
uvig_176988_CDS_0039 T R Q ----K I H E Y D N ----D K -I -I A -L L -A E I L E V -L ----------S --K (111)
+ + E+
AcrIE1 R Q G L E E A E G A C R N I D I M R A -K -W V -E V -C G E V N Q -H -G I R V Y G D A I D R D V D
uvig_176988_CDS_0039 2 AcrIE6 0.60 View Alignment uvig_176988_CDS_0039 M D -T Q E Y Y R A I I ----G -I -N ----T A N L A A N ------L -Q -N -V E I N E N I L T R Q K I H E Y (60)
M +E I L + I +
AcrIE6 M N N D T E V L E Q Q I K A F E -L -L -A D E L K D R L P T L E I L S P M Y T -A -V M V T Y D L I G K Q L A S R R A
uvig_176988_CDS_0039 D -N D K I I A L L A E I L E V --L ----S K (85)
+ + + +
AcrIE6 E L I E I L E E Q Y P G H A A D L S -I K N L C P
uvig_176988_CDS_0039 3 AcrIC3 0.57 View Alignment uvig_176988_CDS_0039 M D --T Q E Y Y -R ---------A I I -G I N T -------A N L -A A N ------------------(60)
M + R + +
AcrIC3 M S I Q V T S T N G R T V N L E I E L G S V -V A S S G Q V K F M A D K -T D R G -L E S R F L V P E A G N R R I E V A
uvig_176988_CDS_0039 --L Q N V ----E I -N -E N I L T R Q K I H E Y D -N -D K I I A L L A E I L E V L S K (107)
+ ++ + + A A I +L
AcrIC3 L T G R D L E A A N A -L -F S E L A A S V E A T N E -M -Y R E L D A E R A Q I N K A L E G
uvig_176988_CDS_0039 4 AcrIF23 0.55 View Alignment uvig_176988_CDS_0039 M -D T Q E Y Y R ----------A I I -G I N ------T -A N L -----------------------(60)
M Q + N
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G Q W -I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T F
uvig_176988_CDS_0039 -----------------------A A N -----------L Q N -V -E I N E N I L T R Q K I H E --- (120)
+ + +
AcrIF23 G G R A L T G T A R Q K E W A E K I R A E K V Q Q -M N Q D Q A E M A C D P S G L -L T A A K F W I E N R N D S A Q E I
uvig_176988_CDS_0039 -Y -------D N ------------D -K I -I -A -L L -A E I L E V L S ---K (167)
K + AE +
AcrIF23 A G F V M Q Q K A L -L A Q H R S A K A A G Q A D K -V -A -K I -A A E Y N A L T A R W G F
uvig_176988_CDS_0039 5 AcrIIA11 0.53 View Alignment uvig_176988_CDS_0039 M D T --Q -E -Y -Y -R -----A I I ---------G -I N T A N L ---------------------(60)
M
AcrIIA11 M A D M T L R -Q -F -C E R Y R K G D F -L A K D R E T Q I E A G W Y D W F C D D K A L A G R L A K I W G I L K G I T
uvig_176988_CDS_0039 ------------A A N --------------------------------L ------------ (120)
AcrIIA11 S D Y I L D N Y R V W F K N -N C P M V G P L Y D D V R F E P L D E E Q R D E L Y F G V A I D D K R R E K K Y V I F T A
uvig_176988_CDS_0039 ----Q N -------------V -E I N E N I L T R Q K I ------H E ----Y ----D N D K I I A L L A (180)
N E L + I +
AcrIIA11 R N D Y E N E C G F N N V R E V R Q F -I N G W E D E L K N E E F Y K A R E K K R Q E M E -E A N N K F A E I M Q R A D
uvig_176988_CDS_0039 E I L E V L S -K (189)
EIL L
AcrIIA11 E I L W N L K E D
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;