3D Structure for uvig_176433_CDS_0026 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 90.08 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_176433_CDS_0026 1 AcrVA5 0.71 View Alignment uvig_176433_CDS_0026 M I K F R T Y K S N L A L A L N A I F D M D N T C F S Y G S I D G V Y Q E K D D V L E I L M I I N N K P H N G N F K K F (60)
M + + I +D + I M+ + ++G
AcrVA5 M K I -E L ---S G G Y I C Y S I ------------E -------E D E V T I D M V E V T T K R Q G I G S Q L
uvig_176433_CDS_0026 M N F I S N Y C R Q R N K K L A F V E -I --W ---N -N S L R H K L L N E G Y T L Y P ---N N G L -V K D N F N E (120)
+ R + + + L + P L + +
AcrVA5 I D M V K D V A R E V G L -P I G L Y A Y P Q D D S I S Q E D L I E F Y F S N D F E Y D P D D V D G R L M -R --W -S
uvig_176433_CDS_0026 2 AcrIB1 0.61 View Alignment uvig_176433_CDS_0026 M I K F --R T Y K S ----N L ----A L A L N A ------------I -F ----D ----M -D N T C F -S (60)
M R + + ++
AcrIB1 M E S K N L R K L L N E Y E E I D I N E M L K N F R S I K N S G T K N D I E I F L H E K A I -K F E K S S I S S T Y V V
uvig_176433_CDS_0026 Y --G -S I D G V Y Q E K D -----------------------------------D V L E I L M I I N (120)
I G + + +
AcrIB1 F S E D N E I L G Y F T I A N R S L V I P K E N F G I L S K T Q Q K K L G N S A A I L K N G D L M T S S F L L G Q L G K
uvig_176433_CDS_0026 N K ---P -H ----N -G -N -F K K F M N -F I S N Y C R Q R N K K L A F V E -I W N N S L R H K L L N E G Y T L (180)
N N K +++E L N G
AcrIB1 N Y S D D I E N L I T G -R -E -L L T F A Y -D L F L K I K E L I N V K Y I W L E C Q N E P K L I S F Y Q N F G F K M
uvig_176433_CDS_0026 Y -P ------N N G L -V K D N F N E (201)
+
AcrIB1 L E S L T S E E G L K -V M -I M E -L K
uvig_176433_CDS_0026 3 AcrIF5 0.47 View Alignment uvig_176433_CDS_0026 M I K --F -R T Y K S N L A L A L N A I F D M D N T C F S Y G S I D G V Y Q E -K D D V L E -I L M I I N N K P H N G (60)
M + + GS + +D + +
AcrIF5 M S R P T V V T V T E T P R -------N --------P G S Y E V N -V -E R D G -K M V V G R -A R A G ---S
uvig_176433_CDS_0026 N F K K F M N F I S N Y C R Q -R N K K L A F V E I W N N S L R H K L L N E -G Y -T -L -Y P N N G L V K D N F N E (119)
+ + + P +
AcrIF5 D P G A A A A K A M Q M A M E W -G S P N Y V I L G S -------N K -V L --A -F -I -P E Q L R -V ---K M
uvig_176433_CDS_0026 4 AcrVIA1_Lse 0.46 View Alignment uvig_176433_CDS_0026 M I -K F --R ----T Y K S -------------N L A L A L N A --------I F D ------------(60)
MI L A
AcrVIA1_Lse M I Y Y I K D L K V K G K I F E N L M N K E A V E G L I T F L K K A E F E I Y S R E N Y S K Y N K W F E M W K S P T S S
uvig_176433_CDS_0026 --------M D N T C F S Y -G --S -I D G V Y Q E --------------K ---------------- (120)
G+
AcrVIA1_Lse L V F W K N Y S F R C H L L F V I E K D G E C L G I P A S V F E S V L Q I Y L A D P F A P D T K E L F V E V C N L Y E C
uvig_176433_CDS_0026 -D -D -V -L -E -I L M I I N N ----K P H ----N ---------G ----N -F -K -K F -M N -F I S N (180)
+ + F
AcrVIA1_Lse L -A -D -V -T -V V E H F E A E E S A W H K L T H N E -T E V S K R V Y S K D D D E -L -L -K Y -I -P E F -L D
uvig_176433_CDS_0026 Y C R Q R N K K L A F V E I W -------N N S L R H K L L N --------E ----G Y -T -L Y P ----N N -(240)
+ K N + + Y +
AcrVIA1_Lse T I A T N K K S Q K -Y N Q I Q G K I Q E I N K E I A T L Y E S S E D Y I F T E Y V S N L -Y R -E -S A K L E Q H S K
uvig_176433_CDS_0026 G L -V K D -N -F N E (252)
+K
AcrVIA1_Lse Q -I L K -E -E -L N
uvig_176433_CDS_0026 5 AcrIIA4 0.45 View Alignment uvig_176433_CDS_0026 M I K F R T Y -K S ---N L A L A L -N A I F D M D N T C F S Y G S -I D G V Y Q E ---K -D -D V L E I L M I I N (60)
M + + + + I I
AcrIIA4 M N -I N D L I R E I K N K D Y T -V K -L S G T D S -N S -I T Q -L I ---I R -V N N -D -G N E Y V I S E -S -
uvig_176433_CDS_0026 N K P H N G N -F K K F M N F I S N Y C R Q R N K K L A F V E I W N N S L -R -H -K L L N -E G Y T L Y P N N G L V K (120)
+ ++ E N + +K
AcrIIA4 -E -----N -E S I V E K F I S A F K N ----G W N Q E Y E --D -E -E -E -F Y N D -M ----Q T -I T L K
uvig_176433_CDS_0026 D N F N E (125)
AcrIIA4 S -E L N
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;