3D Structure for uvig_175957_CDS_0045 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 87.58 ;
Download
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_175957_CDS_0045 1 AcrIE1 0.71 View Alignment uvig_175957_CDS_0045 V K E N S I E K D I K -I A E R F -I K -S I K T D K E Y K K E G W H G Y F N E E I V E L A R I L E H I L K E L K R F E (60)
+ + + Y +
AcrIE1 M E -K K L ---S -D A Q V -A L -V A A W R -K --Y ---------P D L R E -----------------
uvig_175957_CDS_0045 N M Y E A E H Q I H L -V -R N E -Q -L D -R -K -Q -K A I I K C N E L E N E N K E L K N -E I K S W -K K Y S D E (120)
+ +
AcrIE1 --------S L E E -A -A S I -L -S L -I -V -F -------Q A -------E -T L S D Q -A N E L A N Y
uvig_175957_CDS_0045 Q E E N I -A E K N N I I C N L E -F Q R E K Q Q K E I E E K -D K I I N V M A E Y I S K K E I L V D K H C -Y A L T A (180)
+ E+E + I +M V H +
AcrIE1 I R R Q G L -----------E --------E A E G A C -R N I D I M R A K W V E V C G E V N Q H G I -R V Y G
uvig_175957_CDS_0045 E A I K Q W F E K Q I K (192)
+ ++ +
AcrIE1 D ----A I D R D V D
uvig_175957_CDS_0045 2 AcrIC3 0.59 View Alignment uvig_175957_CDS_0045 V K E N -S I E K D I K I A E R F I K S I K T D K E Y K K E G W H G Y F N E E I V -E -L -A R I L E H I L K E L K R F (60)
+ L
AcrIC3 M S I -Q V T S T ----N -G -----------R T V -----------N -L -E ----I E ----L ---
uvig_175957_CDS_0045 E N M Y E A E H Q I H L V R N -E Q L D -R K Q K A I I K C -N -E L E N E N K E L K N E I K S W K K Y S D E -Q E -E (120)
+ Q++ D + +
AcrIC3 G S V V A S S G Q V K F M -A D K -T D R G -L --E S R -F -L -V --P ----E A ---------G N R -R I -
uvig_175957_CDS_0045 N I -A E K N N I I C N L E F Q R E K Q Q K E I -E -E K -D -K I I -N -V -M -A -E Y I S -K K E I L V D K H C Y (180)
A + ++ + + Y
AcrIC3 E -V A -------L -------T ----G -R -D L -E -A A N -A -L -F -S -E L A A -S V E A T N E -M Y
uvig_175957_CDS_0045 A L T A -E -A I K -Q W F E K Q -I K (200)
+ K
AcrIC3 R E L -D -A -E R A -Q I N K A L E G
uvig_175957_CDS_0045 3 AcrIIA11 0.59 View Alignment uvig_175957_CDS_0045 V K E N S I E K D I K I A E R F I K S -I K T D -K -E -Y K K E G W H G Y F N ---E -E -I -V -E L A R I L -E H (60)
+ ++ + D GW F LA+ +
AcrIIA11 M A D M T L R Q F C E R Y R K G -D F L -A K D R -E -T Q I E A G W Y D W F C D D K -A -L -A -G R L A K -I W G I
uvig_175957_CDS_0045 I L K E L -----K -R F E -N M Y E ----A E -H -Q -I H -L -----V R N -E Q L D ------------(120)
LK + + EQ
AcrIIA11 -L K G I T S D Y I L D N Y -R V W F K N N C P -M V -G -P L -Y D D V R F E P L D E E Q -R D E L Y F G V A I D D K
uvig_175957_CDS_0045 R --K ----Q -K --A I -I -K C N E L E N -E N K E L K N E I K S -W -K -K -Y S D -E Q E E N I A E K N N I (180)
R K E E+++ + E N
AcrIIA11 R R E K K Y V I F T A R N D -Y -E N ----E -C G F N -N V R E V R Q F -I -N -G W -E D E L K -N -------
uvig_175957_CDS_0045 I C N L E F Q R E K Q Q K E I E E -K D K I I N V M A E Y I -S K -K -E I -L V D K H C Y A L T A E A I K Q W F E K Q (240)
+ + + A +
AcrIIA11 ---E -----E -------F ----Y K A R E K K -R -Q E -M -E E -A N N K F -A E I M Q R A D E I L W N L
uvig_175957_CDS_0045 I -K (243)
AcrIIA11 K E D
uvig_175957_CDS_0045 4 AcrIE6 0.57 View Alignment uvig_175957_CDS_0045 V K E N S I E K D I K I A E R F I K S I K T D K E Y K K E G W H G Y F N E E I V E L A R I L E H I L K E L K R F E -N M (60)
N E + +
AcrIE6 M -N N D T E V -L E --------------Q -----------Q --------------I ----K --
uvig_175957_CDS_0045 Y E A E H Q I -H L V R N E Q L D R K Q K A I I K C N E L E N E N K E L K N E I K S W K K Y S D E Q E E N I A E K N N I (120)
L+ E DR +
AcrIE6 -----A -F E L L A D E L K D R L P T ---L -E I ---L -------------------------S P M
uvig_175957_CDS_0045 I C N L E F Q R E K -Q Q K -E I -E -E -K -D -K -I -I -N V M A E Y I S K K E I L V D K H C Y A L T A E A I K Q (180)
+ + + K + + E + L
AcrIE6 Y T A V M V T Y D L I -G K Q -L A -S -R -R -A -E -L -I E I L E E Q Y P G H A ---A ----D L -------
uvig_175957_CDS_0045 W F E -K Q -I K (189)
AcrIE6 S I -K N -L C P
uvig_175957_CDS_0045 5 AcrIF23 0.55 View Alignment uvig_175957_CDS_0045 V K E N S I E K D I K I A E R F I K S I K T D K -E -Y K K E G W H G Y F N E E I V E L A R I L E H I L K E L K -R F E (60)
N ++ G E +
AcrIF23 M T -N -F ---Q T W L D S A -----D --I -P V Q Q N G Q --W I D L E T --------------G I A Y D
uvig_175957_CDS_0045 -N -M Y E -A E --H ------Q -I -H L -V R N -E Q L D R K ---Q K -A I I K C N E L E N -E N K E L -K N (120)
+ Y + + +
AcrIF23 P S Y N Y -A --A N T R R A S L S -P -R G -I D A -R A V A K T F G G R --A -L ---T G T A -R Q K E W -A E K
uvig_175957_CDS_0045 E I K S W K K Y S D E Q E E N I -A E K N N I I C N L E F Q R E K Q Q K E I E E -K D K I I -N V -M A E -Y I S K -K (180)
+ + ++ + F E + + + +
AcrIF23 I R A E K V Q Q M N Q D Q A E M A C D P S G L L T A A K F W I E N R N D S A -Q E I A G -F V M -Q -Q K A L L A -Q H
uvig_175957_CDS_0045 E I -L V D -K H ---C -Y A -L -T A -E -A I -K Q W F E K Q I K (216)
+ +
AcrIF23 R -S A K -A -A G Q A D K V -A -K I -A -A E -Y N A L T A R W G F
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;