3D Structure for uvig_174646_CDS_0006 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 92.01 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_174646_CDS_0006 1 AcrIE1 0.70 View Alignment uvig_174646_CDS_0006 M -N K L K Y I -A T ---I G Y -C ----Y W R L N N I Y E Q L S K L K S N I E I L V D I A C -G Y N E M -E -E -(60)
M KL + + + L + LS + ++E L D A N
AcrIE1 M E K K L S D A Q V A L V A A W R K -Y P D L R E S L E E A A S I L S L I V F Q A E T L S D Q A N E L A N Y I R -R -Q
uvig_174646_CDS_0006 A -R K -E -C -I S -L L -E Q I I E S -K K A I G A D Y S E D S K F L D K L K S K E -I --Y E (110)
+ I+ + E + ++ +
AcrIE1 -G -L E -E -A -E G -A C -R N I D I M R A K W V E V C G E V N Q H G I R V Y G D A I D R D V D
uvig_174646_CDS_0006 2 AcrIE6 0.62 View Alignment uvig_174646_CDS_0006 M N K L K Y I A T I G Y C Y W R L N N I Y E Q L S K L K S N I E I L V D I A C G Y N E M E E -A R K E C I S L L E Q I I (60)
MN + + LK + L + + + Q++
AcrIE6 M N --N D T E V ---L E Q Q I K A F E L L A D E L K D R L P T L E I L ---S P M Y T -A V M V T Y D L I G K Q L A
uvig_174646_CDS_0006 E S K K A I G A D Y S -E D S K F L D K -L K S K E I Y E (89)
+ + + K +
AcrIE6 S R R A E L I E I L E E Q Y P G H A A D L -S I K N L C P
uvig_174646_CDS_0006 3 AcrIC3 0.55 View Alignment uvig_174646_CDS_0006 M -N K L K Y -I A ---T -------I ---G -Y C Y W R L N N I ---Y E Q L S K L -K S -N I E I -L V D I A (60)
M + + + + + E+ + + +
AcrIC3 M S I Q V T S T N G R T V N L E I E L G S V V A S S G Q V K F M A D K T D R G L E S R F L V P E -A G N R -R I E V A -
uvig_174646_CDS_0006 C G Y N E M E E A R -K E C I S L L E Q I I E S K K A I G A D Y S E D S K F L D K L K S K E I Y E (109)
+ E A S L +E + +
AcrIC3 L T G R D L E A A -N A -L F S E L A A S V E A T N E M Y R E ---L D A E R A Q I N K A L -E G
uvig_174646_CDS_0006 4 AcrIF23 0.53 View Alignment uvig_174646_CDS_0006 M N K -L K Y I --A --T ---------------I --G Y -C Y ---W -------R L ----------(60)
M+ + A Y R
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G Q W I D L E T G I A Y D P S Y N Y -A A N T R R A S L S P R -G I D A R A V A K T
uvig_174646_CDS_0006 ------N -------N ----I --------Y ---E ----Q L S K L K S N I E I L V -D I A C -G Y N E (120)
I S L + + + +E
AcrIF23 F G G R A L -T G T A R Q K E W A E K I R A E K V Q Q M N Q D Q A E M A C D P S G L L T A A K F W I E N R -N D S A Q E
uvig_174646_CDS_0006 M E E A R K -E C I S -L L E Q I I E S K -K A I G A D Y S E D S K F L D K L K S K E I ---Y E (169)
L S A A K + +
AcrIF23 I A G F V -M Q Q -K A L -L A Q H R S A K A A G Q A --D K V A K I A A E Y N A L T A R W G -F
uvig_174646_CDS_0006 5 AcrIIA11 0.52 View Alignment uvig_174646_CDS_0006 M N -K -L K Y I -A ---T -------I ----------------G Y C Y W R L N N ------------(60)
M L+ RL
AcrIIA11 M A D M T L R Q F C E R Y R -K G D F L A K D R E T Q I E A G W Y D W F C D D K A L A G R L A K I W G I L K G I T S D Y
uvig_174646_CDS_0006 I Y E Q L S K L ----K S ----N I E I L V ----------D -I A ----C ----------------G (120)
I ++ + + D +
AcrIIA11 I L D N Y R V W F K N N C P M V G P L Y D D V -R F E P L D E E Q R D E L Y F G V A I D D K R R E K K Y V I F T A R N -
uvig_174646_CDS_0006 -Y ------------N -E M E -E A R K -E C I -S ------L L E Q I I E S K K A I G -A D Y S E D S K F L (180)
Y E + E + E +
AcrIIA11 D Y E N E C G F N N V R E V R Q F -I N G W -E D E L -K -N E E F Y K A R E K K R Q E M E E A -N N K F A E I M Q R A
uvig_174646_CDS_0006 D K L K S K E I Y E (190)
D + +
AcrIIA11 D E I L W N L K E D
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;