3D Structure for uvig_172069_CDS_0016 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 92.08 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_172069_CDS_0016 1 AcrIIA21 0.81 View Alignment uvig_172069_CDS_0016 M A K N G N T F F V Q L S R E I F T E -K Y S D L S R D A K W L Y V V L N E L E H R Y -T ----N -G E -N -D C F Y (60)
M + + + + ++ YS LS +Y+VL + +
AcrIIA21 M D -Y -D N E N Y L I P K I L L Q D D F Y S S L S A K D I L V Y A V L K D R Q I E A L E K G W I -D T D G -S I Y L N
uvig_172069_CDS_0016 R S N E D L A L D A Q M S L A T V K K Y K K E L V N S G L I Q H W I G H L I M P D G K K S E K K F S Y Y R I L -R (117)
+LA + S T L LI + G I
AcrIIA21 F K L I E L A K M F S C S R T T M I D V M Q R L E E V N L I E R E R V -D -V F Y G -Y --S L P Y K T Y I N E V
uvig_172069_CDS_0016 2 AcrIA3 0.47 View Alignment uvig_172069_CDS_0016 M A K N G N T F F V Q L S R E I F T E K Y S D L S R D A K W L Y V V L N E L E H R Y T N G -E N D C F -Y R ---S N E (60)
M + + K L K L E+ N S+
AcrIA3 M S F Y --I M Y I K V K E -M S E Q K Q I S L R S K Q K E L L Q R F F E I A E V D ---E -N G D L C I P L Y D S S G
uvig_172069_CDS_0016 D L A L -D A -Q M S L A T V K -K -Y K K -E L V N -S G L I Q H W I G H L -I M P D -G K K S E K K -------F (120)
DL LI + + KK +
AcrIA3 D L T -L F K Q D ---S R K -Y -Q M Y -A Y F -R I L R L I K K ---Q I F -F I K V -K K V K R D K K F L C M H S
uvig_172069_CDS_0016 ----S -Y -Y R I L -R (134)
+L
AcrIA3 N V I D -Q -V K S V L E S
uvig_172069_CDS_0016 3 AcrIE5 0.42 View Alignment uvig_172069_CDS_0016 M A K N G N T F F V Q L S R -E I F T E K -Y S D L -S R D A K W L Y V V L N E L E H R Y T N G E N D C F Y R S N E D L (60)
M + I +
AcrIE5 M S --------N D R N G -I I N -Q I I D -Y T --------------------------G ------
uvig_172069_CDS_0016 A L D A Q M S L A T V K K Y K K E L V N S G L I Q H W I G H L I M P D G K K S -E -K K -F S Y ---Y R I L R (116)
+ + EL I + +
AcrIE5 -----T D R D H A E R I Y E E L R A D D R I Y F D D S V G L D R -Q G L L I -R E -D V D L M A V A A E I E
uvig_172069_CDS_0016 4 AcrVA3 0.40 View Alignment uvig_172069_CDS_0016 M A -K N G N T F F V Q L S R E I F T E K Y S D L -S R -D A K W L -Y V V L N E L E H R Y T N G E N D C F Y R S N E D (60)
M+ K+ + ++ + A L + +G R
AcrVA3 M V G K S K -I D W Q S I D W T K T N A Q I A Q E C -G R -A Y N T V C K M R G K L G K -S H Q G A -K S P -R K D K G
uvig_172069_CDS_0016 L A L D A Q ----M --------S L A T V K K -Y -K K E L V N S G L I Q H W I G H L I M P D G K K -S E ----(120)
+ + K L PD K
AcrVA3 I S R P Q P H L N R L E Y Q A L A T A K A K A S P K A G R F E T N T K A K ---T --W T L K S P D -N K T Y T F T N L
uvig_172069_CDS_0016 -----K K ----------------------------------------F -S --Y Y R I L --- (180)
+ +
AcrVA3 M H F V R T -N P H L F D P D D V V W R T K S N G V E W C R A S S G L A L L A K R K K A P L S W K G W R L I S L T K D N
uvig_172069_CDS_0016 R (181)
+
AcrVA3 K
uvig_172069_CDS_0016 5 AcrIF24 0.38 View Alignment uvig_172069_CDS_0016 M A K N G N T F -------------------F --------------------------------(60)
M +
AcrIF24 M N A I H I G P F S I T P A A R G L H Y G G L P H H Q W T L Y Y G P R E M A I K T L P D S Y T S S E V R D E F S D I I A
uvig_172069_CDS_0016 --V Q -L -S R E I F -T E K -Y S ----D ------------------------------L ----- (120)
V + L
AcrIF24 E F V I D -A R H R Y -A P -D V L E L V N S -D G D A V L A R V A V S R L P E A L S G C I P D D R F P Y W L L T A S R
uvig_172069_CDS_0016 ----------------S R D A K W L Y V V L N E L E H R Y --T N -G -E -N -D C F Y R S N E D L A L D -- (180)
+ ++ L + + ++ +L
AcrIF24 P R L G L P V T L N E Y T A L A V E L S A P P L A W I T G L L P G E V L -T H -D -A -E E W R P P T S W E L R H V V G
uvig_172069_CDS_0016 -A -Q M S L A T V K K Y K K E L V N --S -G L I Q H W -I -G H L I M P -D G -K -K S E K -K ------F S Y Y (240)
+ + ++ L + +
AcrIF24 E -G S F T G V S G A A A A A L L G M S A -T -N F R K Y T -A -G D -S -A A -N -R -Q K I S F A A W H Y L L D R L
uvig_172069_CDS_0016 R -I -L R (246)
+
AcrIF24 G V K R A S
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;