3D Structure for uvig_170951_CDS_0092 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 89.60 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_170951_CDS_0092 1 AcrIB1 0.82 View Alignment uvig_170951_CDS_0092 M A E L R L K V M ----D K ----D -V -S S S L ---S -C --G V R S I D D L M R T A -Y N K T L Y K Q G L A Y (60)
M L+ + + I+ + Y
AcrIB1 M E S K N L R K L L N E Y E E I D I N -E -M L K N F R S I K N -S G T K N D I E I F L H E K A I K F E K S S I S S T Y
uvig_170951_CDS_0092 N I V -L N G H L V G N C M L K I -V C L -C D E T E E -Y Y -V -------------T --D -K Q Y A A L E I S (120)
+ ++G + + E+ +
AcrIB1 V V F S E D N E I L G Y F T I A N R S L V I P K E N F G I L S K T Q Q K K L G N S A A I L K -N G -D L M T S S F L L G
uvig_170951_CDS_0092 Y I A I D A R V -Q -R K G I G T I V L K E L I Q K A K E I S N V L P I R F L V I D A --F E D K K E W Y E K A G F G Y (180)
+ G +L + I ++ ++ + ++ +Y GF
AcrIB1 Q L G K N Y S D D I E N L I T G R E L L T F A Y D L F L K I K E L I N V K Y I W L E C Q N E P K L I S F Y Q N F G F K M
uvig_170951_CDS_0092 I Q -R -----N R I L V I Q G Q L Q (200)
+ ++ I L
AcrIB1 L E S L T S E E G L K V M -I M -E L K
uvig_170951_CDS_0092 2 AcrVA5 0.60 View Alignment uvig_170951_CDS_0092 M A E L R L K V M D K D V S S S L -S C G V R S I D D L M R T A Y N K T L Y K Q G L A Y N I V L N G H L V G N C M L K I (60)
M + L + +
AcrVA5 M -K I E L ---S G G ---Y I C -Y S I ------------------------E -------------
uvig_170951_CDS_0092 V C L C D E T E E Y Y V T D K Q Y A A L E I S Y I A I D A R V Q R K G I G T I V L K E L I Q K A K E I S N V L P I R F L (120)
+ I + + R GIG+ ++ + A+E +
AcrVA5 ----------------E D E V T I D M V E V T -T -K R Q G I G S Q L I D M V K D V A R E -V ----G L P I
uvig_170951_CDS_0092 V I D -A -------F E D K K E W Y E K A G F G Y I Q R --N R I L V I Q G Q L Q (163)
+ ED E+Y F Y L +
AcrVA5 G L Y A Y P Q D D S I S Q E D L I E F Y F S N D F E Y D P D D V D G R L M -R -W -S
uvig_170951_CDS_0092 3 AcrIC11 0.42 View Alignment uvig_170951_CDS_0092 M A -E --L R L K V -M D K D --------V -S S S -L S C G V R S I D D L M R T A Y N K T L Y K Q -G L A Y N I (60)
M E + + + D + G + + +
AcrIC11 M N K E T Q I T A S A V V G E D K R L E F L S K H F G V R F A R R G E A L V F A W L L R L A K V P -I E -W T R L Q Y -
uvig_170951_CDS_0092 V L -N G H L V G N C -M L K I V C L C D E T E E Y Y V T D K Q Y A -A L E I S Y I A I D A R V Q R K G I G T I V L K E (120)
G L IS + ++
AcrIC11 Y T L -S N -S G F Y L A P --R -----------------E -L R I S E C E L ---------S A D A V G I
uvig_170951_CDS_0092 L I Q -K -A K E I S N V L P -I R F L V I D -A ----F -----------E D K K E W Y E K A G F G Y I Q R --(180)
+ + ++ + ++ + Y ++ Y +
AcrIC11 V -A T -M -L T L R Q L --A -H E S A A -C V E A D S T Y P A A K L A V T A S V K F A Q Q Y H H L A A -Y S V K H A
uvig_170951_CDS_0092 -N R I L V I -Q G Q L Q (193)
+ + +
AcrIC11 E S I N I --Y R -A I D
uvig_170951_CDS_0092 4 AcrIA1 0.38 View Alignment uvig_170951_CDS_0092 M A ----------------------------------------E L R -L K V ---M -----D K (60)
M
AcrIA1 M R S K M I K K E E K D N K I Y I T V K D E E T G I E W T A V V E K V E F E W C V K Q K E E -L E V E D A E K S V M L D
uvig_170951_CDS_0092 -D V -S S S ---L S C G ----------------------------V R S -----------I D D L (120)
+ + S +
AcrIA1 Y A -L F G N C A I P K V -T A E E Y K N S L T K Y T G E K M S R L L H I L Y N Y E I V S Q N D T K N I W V T E L S R C
uvig_170951_CDS_0092 M R T A Y N K T L Y -------------------------------K -Q G L A -Y N I V ---L N -G H (180)
R Y + +
AcrIA1 L R R S Y L M R K -E G K T K V G L N E A M K M H I G S G L H M R L Q S L L R K H -G -F E T E V R V Q R K T A L G F Q
uvig_170951_CDS_0092 L V G N C M L K I V C L C D E T E E Y Y V T D K Q Y A A L E I S Y -I -A -I D -A R V Q R K -G I G T -I V L K -E L (240)
+VG + E ++
AcrIA1 I V G R I D V Y D K -------E ------E N V I Y -E --L -K -Y -T H N D K L -D S V R -L N N -Y L R -Q
uvig_170951_CDS_0092 I Q K A K E -I S N V L -P I R F L V I -D A --------F --E D K K E W Y E K A G F G ---------Y -I -(300)
++ E + + + + + EK
AcrIA1 L N Y Y I E M A ----N -A M K G Y L V I V H A D G S V E E I K R D W A E T D L E K R A N A F G I Y V E E N T -L -P
uvig_170951_CDS_0092 Q -R -----N R I L V I Q G --Q ---L -Q (325)
+ +
AcrIA1 -P -K K S R P D A E C I E C P F Y N F C W G K L
uvig_170951_CDS_0092 5 AcrVIA1_Lse 0.38 View Alignment uvig_170951_CDS_0092 M A -E -L ---R L K V M -----D K D V ------------S S S -L S C -G ----V R S I D D L M R T A Y (60)
M+ K++ S + ++
AcrVIA1_Lse M I Y Y I K D L K V K G K I F E N L M N K E A V E G L I T F L K K A E F E -I Y S R E -N Y S K Y N K W F E M W K S P T
uvig_170951_CDS_0092 N K T L -Y -----K Q G L A Y N I V L N G H L V G N C M --L K -I V C L C D E T E E Y Y V T D K ---Q ----Y (120)
+ + + L+ I G +G ++ + + D
AcrVIA1_Lse S S L V F W K N Y S F R C H L L F V I E K D G E C L G I P A S V F E S V L Q I Y L A D P F --A P D T K E L F V E V C N
uvig_170951_CDS_0092 -----A -A -L E -I S Y I A I D A R V Q --R -K -G I G T ---------------I V L K E L I Q K A K E (180)
A + ++ + T + E + +
AcrVIA1_Lse L Y E C L A D -V -T V V E H F E A E E S A W H K -L -T H N E T E V S K R V Y S K D D D E L L K Y I P E F L D T I A T
uvig_170951_CDS_0092 I S N V L P I R F L V I D A F ----E D K K E W Y E K --------A G ---F -G Y I -Q R ----N R -I L V I (240)
+ + YE ++ ++
AcrVIA1_Lse N K -K S Q K Y N Q I Q G K I Q E I N K E I A T L Y E S S E D Y I F T E Y V S N L Y R -E S A K -L E Q H S K Q -I L -
uvig_170951_CDS_0092 Q G Q L Q (245)
L+
AcrVIA1_Lse K E E L N
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;