3D Structure for uvig_169983_CDS_0016 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 94.66 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_169983_CDS_0016 1 AcrIB1 0.82 View Alignment uvig_169983_CDS_0016 M T E S K Y T Y G -K E -V ---E Y T I E K L -T Q -K -N I F Y T E T F D --C G N E E I N H Y L K H K A L D -D -(60)
M E + + + + +I L+ KA+ +
AcrIB1 M E S K -N -L R K L -L N E Y E E -----I D I N E -M -L K N F R S I K N S G T K N D I E I F L H E K A I K F E K
uvig_169983_CDS_0016 -D I G L T Y L V I D Q Y S S V V G Y C T I A C S G I T H R -Y -Q N N -------------------I -R -T (120)
I TY+V + ++GY TIA +
AcrIB1 S S I S S T Y V V F S E D N E I L G Y F T I A N R S L V I P K E N F G I L S K T Q Q K K L G N S A A I L K N G -D -L M
uvig_169983_CDS_0016 I P S I E I R Y F A I D S K L Q K L Q Y D K T E -E H Y Y F S D Y V M S E F M Y K C S E I A E N I I A A R Y I I L Y S -(180)
S + + + I +I ++YI L
AcrIB1 T S S F L L G Q L G K N Y S D --D -I ----E -N L I T G R E L L T F A Y D L F L K I K -E L I N V K Y I W L E C Q
uvig_169983_CDS_0016 V -E D A I K F Y T R L G F C D F A E F F E A D K Y R Y I D G C K P M Y I E I P (220)
+I FY+ GF +G K M E+
AcrIB1 N E P K L I S F Y Q N F G F K M L E S L -T ---S --E E G L K V M I M E L K
uvig_169983_CDS_0016 2 AcrVA5 0.57 View Alignment uvig_169983_CDS_0016 M T E S K Y T Y G K E V E Y --T I E K L T Q K N I F Y T E T F D C G N E E I N H Y L K H K A L D D D I G L T Y L V I D (60)
M
AcrVA5 M -K ----------I E L --------------------------------------------
uvig_169983_CDS_0016 Q Y S S V V G Y C T I A -C S G I T H R Y Q N N I R T -I P S I E I R Y F A I D S K L Q K L Q Y D K T E E -H -Y Y F S (120)
+ GY + I +
AcrVA5 S -G ---G Y I C Y S I --E -----------E -D E V T I D M V E V T -T K ----------R -Q -G I G
uvig_169983_CDS_0016 D Y V M S E F M Y K C S E I A E N I I A A R Y I I L Y S --------V -E -D A I K F Y T R L G F C D F A E F F E A (180)
+ + I LY D+I FY F +
AcrVA5 S Q L I D M V K D V A R -E ---V -G -L P I G L Y A Y P Q D D S I S -Q -E D L I E F Y F S N D F E Y D P D -D --
uvig_169983_CDS_0016 D K Y R Y -I D -G C K P M Y I E I P (199)
+ M
AcrVA5 -----V --D -G R L M R -W -S
uvig_169983_CDS_0016 3 AcrIC11 0.41 View Alignment uvig_169983_CDS_0016 M T E S K Y T Y G K -E V E Y -T -I E K L T Q -K N I F Y T E T -F -----D -C -G N E E I N H Y L K H K A L D D (60)
M+ K + K + F G + L + A
AcrIC11 M N -------K E -T Q I T -A S A V V G E D K R L E F L S K H F G V R F A -R -R G E A L V F A W L L R L A K V P
uvig_169983_CDS_0016 D I -G L T Y L V I D Q Y S S V V G Y C T I A C S G I T H R Y Q N N I R -T I P S I E -I R Y F A I D ---S --K L Q (120)
+ S G + + + +
AcrIC11 I E W T R L Q Y Y T L S N S ---G F Y L A P R E L R -I S -E C E L -S A D A V G -I V A T M L T L R Q L A H E S -A
uvig_169983_CDS_0016 K -L Q Y D K T E E H Y ----Y F S -D Y V M S E F M Y K C S E I A E N I -I A A R Y I I L Y S V E D A I K F Y T R L (180)
+ + + F + +K
AcrIC11 -A C V -E A -D -S T Y P A A K L -A V T A S V K F A Q Q Y ----H H -L ------A ----A Y S V K -----
uvig_169983_CDS_0016 G F C D F A E F F E A D K Y R Y I D G C K P M Y I E I P (208)
+ Y I
AcrIC11 ------------H ----A E S I N I Y R A I D
uvig_169983_CDS_0016 4 AcrVIA1_Lse 0.40 View Alignment uvig_169983_CDS_0016 M T -E S -K Y T -Y G K E -----V ----E Y T I E K L T Q K N -I F -Y T E T F D C G N E E I N H Y L K H ---(60)
M + K Y+ K
AcrVIA1_Lse M I Y Y I K D L K V -K G K I F E N L M N K E A V E G L I T F L K K A E F E I Y S R E N Y S K Y N K W F E M W K S P T S
uvig_169983_CDS_0016 --K -A L D D ---D I G L T Y L V I D -Q Y S S V V G Y C T -----I A C --S G -I T -H R Y Q -N N ---I R (120)
L ++ + +G + +
AcrVIA1_Lse S L -V F W K N Y S F R C H L L F V I -E K -D G E C L G I P A S V F E S V --L Q I Y L A -D -P F A P --D T K E L
uvig_169983_CDS_0016 T ---------I P -S I E -I R Y F A I D S K L Q K L Q Y D K T E E -H Y Y F S D ------------Y V M -(180)
+ + + F ++ + + +
AcrVIA1_Lse F V E V C N L Y E C L A D -V T V V E H F E A E E S A W H K -------L -T H N E T E V S K R V Y S K D D D E L -L
uvig_169983_CDS_0016 S -E F M Y -K C S E I A E N I I A A R Y I I L Y S V E D A I K F Y T R L G F C D F A E F F E A -D K Y -------R (240)
+ + + + + + A E + Y
AcrVIA1_Lse -K Y I -P E F -L D T I A T N K K -S Q K Y N Q I Q G K I Q ----E I N K -E I A T L Y E S S E D Y I F T E Y V S N
uvig_169983_CDS_0016 Y --------I -D G -C -K P M Y I E I P (264)
E+
AcrVIA1_Lse -L Y R E S A K L E Q --H S K Q I L K E E L N
uvig_169983_CDS_0016 5 AcrIA1 0.39 View Alignment uvig_169983_CDS_0016 M T E S K Y T Y G -K E ---V --------------------------------------------(60)
M K E
AcrIA1 M R S -K M -I K K E E K D N K I Y I T V K D E E T G I E W T A V V E K V E F E W C V K Q K E E L E V E D A E K S V M L
uvig_169983_CDS_0016 ----------------------------------------------E ---Y T ---I -E K L (120)
+ +
AcrIA1 D Y A L F G N C A I P K V T A E E Y K N S L T K Y T G E K M S R L L H I L Y N Y E I V S Q N D T K N I W V T E -L S R C
uvig_169983_CDS_0016 T Q K N -----I ------F Y T E T F D C G N E E I N H Y L K H K A L D D D I G L T Y L V --I D -Q -Y S S V V (180)
++ + L + V ++V
AcrIA1 L R R S Y L M R K E G K T K V G L N E A M K M H I G S G L H M R L Q S L L R K H G F E T E V R V Q R K T A -L G F Q I V
uvig_169983_CDS_0016 G Y C T -I A C S G I T H R Y Q N N I R T I -P S I E I R Y F A I D S -K -L Q K L Q Y D K T E E H Y Y F S D Y V M S E (240)
G I L
AcrIA1 G R I D V Y D K -----E ------E -N V -I Y E --L K Y T H N D K ---L D S -------V R -L N N Y L R
uvig_169983_CDS_0016 F M Y K C S E I A E N I I A A R Y I I L Y -S -V E D A I K F Y T R --L G F C D F A E F F E A D K -Y ----R Y --(300)
E A A L ++ D
AcrIA1 Q L N Y Y I E M A ----N A M K G Y L V I V H A D --G S V E E I K R D W --A E -T ----D L E -K R A N A F G I
uvig_169983_CDS_0016 -I -D G ---------C --------K -P M Y I E -I P (333)
+ +
AcrIA1 Y V E E N T L P P K K S R P D A E C I E C P F Y N F -C W -G K L
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;