3D Structure for uvig_169355_CDS_0036 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 85.08 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_169355_CDS_0036 1 AcrIE1 0.70 View Alignment uvig_169355_CDS_0036 M N -I -G N I ---T -S -D N F N ---L D S N G K D I Q I E -V Y E Q -L I E Q L Q Q -E N E K L K I Q I S A R E (60)
M + + + + + ++ Q+ ++ + ++
AcrIE1 M E K K L S -D A Q V A L -V A A W R K Y P D L R E S L E E A A -S I L -S L I V F Q A -E T L S D Q A N E L A N Y I R
uvig_169355_CDS_0036 E -E Y K -K L E D -N W -N K L -K A Y L N -D K S E R A V G E D E Y V Y -D -E I Y -N E M Q E I E Q G S -D S K (119)
+ + K + GE +Y +
AcrIE1 R Q -G L E E A -E G -A C R -N I -D I M R A -K W V E V C G E V N Q H G I -R -V Y G D ----A I D R -D -V D
uvig_169355_CDS_0036 2 AcrIE6 0.63 View Alignment uvig_169355_CDS_0036 M N I G N I T S D N F N L D S N G K D I Q I E V Y E Q L I E Q L Q Q E N E K L K I Q I S A R E E -E Y K K L E D -N W N (60)
MN T QI + E L++ L L I S +
AcrIE6 M N -N D -T E V L E --------Q Q I K A F E L L A D E L K D R L P T L E I L -S P M Y T A V M V T Y D -L I G K
uvig_169355_CDS_0036 K L K -A -Y L N D K S E R A V G -E D E -Y -V Y D E I Y N E M Q E I E Q G S D S -K (104)
L ++ + +
AcrIE6 Q L -A -S R R -A E L I E I L E E Q -Y P G H ----A A -D L ---S I K -N L C P
uvig_169355_CDS_0036 3 AcrIC3 0.62 View Alignment uvig_169355_CDS_0036 M N I G N I --T S ---------D -N F N L D S N G K -D -I Q I E V Y E Q -L I E ---Q L Q Q --------(60)
M+I + + + S ++ + +E +
AcrIC3 M S I Q V T S T N G R T V N L E I E L -G S V V A S S G -Q V -K F M A D K T D R G -L E S R F L V P -E A G N R R I E
uvig_169355_CDS_0036 --E N E K L -K -I -Q I -S -A -R -E -E -E Y -K -K -L E D N W N K L K A Y L N D K S E R A V G E D E Y V Y D (120)
+ + + Y
AcrIC3 V A L T G R D L -E -A -A N -A -L -F -S -E -L A -A -S ----V -------E --------A T N E M Y R
uvig_169355_CDS_0036 E I Y N E M Q E I E Q G S D S K (136)
E+ E I +
AcrIC3 E L D A E R A Q I N K A L E -G
uvig_169355_CDS_0036 4 AcrIIA19 0.59 View Alignment uvig_169355_CDS_0036 M N I -G N I T S D N F N ----L D S -N -G K D -I Q I -E -V Y E Q L I E Q L Q Q E N E K L K I -Q I S A R E E -(60)
M + + N + + LI + L++
AcrIIA19 M K L I V E V E E T N Y K N L V N Y T -K -L T N -E -S H N -I L V N R L I S E Y I T K P Y E L R L D L S E R Y S N R
uvig_169355_CDS_0036 E Y K K L E D N W N K L K -A Y L N -D K S ----E --R A ----V G E D E Y ----V Y D E I -Y N E M Q E ---(120)
+ + E + +E +
AcrIIA19 D L I E F K F M L I E Y C K -E A L Q -D I K E L A N S D -E A Y E T D E A F E A V F R Q L F E E -V I S N P D T V L K
uvig_169355_CDS_0036 ----I E Q G S -D S K (133)
+ ++K
AcrIIA19 A F H S Y T S F L E E N K
uvig_169355_CDS_0036 5 AcrIF23 0.57 View Alignment uvig_169355_CDS_0036 M N -I G N I -------T --S -D -----------N -F N ---------------L D S N ------(60)
M+ + + +D
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G Q W I D L E T G I A Y D P S Y -N Y A A N T R R A S L S P R G I D A R A V A K T F
uvig_169355_CDS_0036 --G K D I Q I E V Y E Q L I E Q L Q -Q E N -E K L K I Q I S A R E E E Y K K L -E D N -W N K -L K A Y L N -D K S (120)
+E + E + +
AcrIF23 G G R A L T G T A R Q K E W A E K I R A -E K V Q Q M N Q D Q A E M A C D ----P -S G L -L T A -A K F W I E N R -
uvig_169355_CDS_0036 E ----R A -V G ----E D E Y -----------V Y D E I Y N E M Q E I E Q -G S D --S -K (172)
+ +
AcrIF23 N D S A Q E -I -A G F V M Q Q K A L L A Q H R S A K A A G Q A D K V A K I A A E Y N A -L T A R W G F
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;