3D Structure for uvig_167629_CDS_0007 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 92.00 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_167629_CDS_0007 1 AcrIB1 0.84 View Alignment uvig_167629_CDS_0007 M R K T I Q N F K ---P V I E A -L -S E G N I -D -L -I R N F F ---V ---G E K A F D D F I K E E A I N D M I (60)
M + E I ++NF + F++E AI
AcrIB1 M E ------S K N L R K L L N E -Y E E I D I N -E -M L K N F R S I K -N S G T K N D I E I F L H E K A I K F E K
uvig_167629_CDS_0007 S G D G V T Y L I I N E V S K R E I V A Y Y T I S S S S I H T I D R ---Y D F E D ---E D -V P Q D -E -K ---R (120)
S TY++ + EI+ Y TI + S+ I + +
AcrIB1 S S I S S T Y V V F S -E -D N E I L G Y F T I A N R S L V -I P K E N F G I L S K T Q Q K -K L -G -N -S A A I L -
uvig_167629_CDS_0007 -E H F S P I S A F L I K M F A V N E K Y Q D T Y Y N D E L V A S L I L K N I I F D L Y D M S T S V V G A K R I I L C A (180)
S FL+ N + +L + ++ +K I L
AcrIB1 K N G D L M T S S F L L G Q L G K N Y S D --D -I E N L I T G R E L L T F A Y D L F L K I K -E L I N V K Y I W L E C
uvig_167629_CDS_0007 V --E K A K K F Y K L N N F K E F D D N Y T L F D K I D A Q D N Y P M Y L A L H N V (223)
K+ FY FK + T M
AcrIB1 Q N E P K L I S F Y Q N F G F K M L E S -L T ---S --E E G L K V M I M E -L -K
uvig_167629_CDS_0007 2 AcrVA5 0.60 View Alignment uvig_167629_CDS_0007 M R K T I Q N F K P V I E A L S E G N I D L I R N F F V G E K A F D D F I K E E A I N D M I S G D G V T Y L I I N E V S (60)
M K +
AcrVA5 M -K -----I E L -------------------------------------------------
uvig_167629_CDS_0007 K R E I V A Y Y T I S -S --S S I H T I D R Y D F E D E D V P Q D E K R E H F S P I S A F L I K M F A V N E K Y Q D T (120)
Y S I M V+
AcrVA5 ---S G G Y I C Y S I -E E ----------------------------D E V T I D M V E V T -T K ---
uvig_167629_CDS_0007 Y Y N -D -E L V A S L I L K N I I F D L Y D M S T S V V G A K R I I L C A --------V -E K A K K F Y K L N N F (180)
+ S ++ + + V I L A E + FY N F
AcrVA5 ---R -Q -G I G S Q L I D M V K D V A R -E ---V --G L P I G L Y A Y P Q D D S I S -Q E D L I E F Y F S N D F
uvig_167629_CDS_0007 K E F D D N Y T L F D K I D A Q -D N Y P M Y L A L H N V (209)
+ M
AcrVA5 E Y D P -D --D ---V ---D -G R L M R ----W S
uvig_167629_CDS_0007 3 AcrVA4 0.40 View Alignment uvig_167629_CDS_0007 M R K T I Q N F K P V I E A L S E G N I D L I R N F F V G E K A -F D D F I K E E A -I N D M I -S G D G V T Y L I I N (60)
M +I + V + + + + +
AcrVA4 M Y E I K L -N D T L I H Q T -D -------D -R V ----N -A F V A Y R Y L L R R G D L P K C E N I A R M Y Y D
uvig_167629_CDS_0007 E V -S -K R E I V A Y Y T I ---S -S S S ------I H T I D R Y D F E D E D V P Q D E K R E H -------F S (120)
K +++ ++ + I+ + E
AcrVA4 G K V -I K T D V I D H D S V H S D -E Q A K V S N N D I I K M A I S -----E ----L G V N N F K S L I K K Q G Y
uvig_167629_CDS_0007 P I S A F L I K ------M F A -V -N E K Y Q D -T Y Y N D -E L V A S --------L -I L -K -N I I F D L Y (180)
P S I + Y ++ ++ +
AcrVA4 P F S N G H I N S W F T D D P --V -K S K T M H N D E M Y L V V -Q A L I R A C I I K E I D L -Y T -E Q L Y N I I K
uvig_167629_CDS_0007 D M S T S V V -G A K -R I -I -L C A ------V -E -----K A K K F Y K L N N F K E F D D -N Y T L F D K I -(240)
+ D
AcrVA4 S L P Y -D -K ---R P N V -V Y S D Q P L D P N N L D L S E P E L W A E Q V G E C M R Y A H N D Q P C F Y I G S T K
uvig_167629_CDS_0007 --D -A -Q D -N ------------Y P M Y L A L H -N -V (274)
+ ++
AcrVA4 R E L R -V N Y I V P V I G V R D E I E R V M T -L E E V R N L H K
uvig_167629_CDS_0007 4 AcrVA2 0.40 View Alignment uvig_167629_CDS_0007 M R K T I Q N ---F --------K -------------------------------P V I E A L S E G (60)
M++TI F ++ L G
AcrVA2 M H H T I A R M N A F N K A F A N A K D C Y K K M Q A W H L L N K P K H A F F P M Q N T P A L D N G L A A L Y E L R G G
uvig_167629_CDS_0007 -N I D L -------------I ----R -N -F F V G E ----K -A -F -D -D F I -K E -E A I N D M I S G (120)
+ + + + ++
AcrVA2 K E D A H I L S I L S R L Y L Y G A W R N T L -G -I -Y Q L D E E I I -K -D -C -K E L -P -D D T P T S I F L N L
uvig_167629_CDS_0007 -D G V T Y L I I -------N E V -S -K -R E I V A Y Y T ---I S S -S S -I H -T I D R Y D F -E D E D V -P (180)
D Y+ I + + I I + I +
AcrVA2 P D W C V Y V D I S S A Q I A T F D D G -V -A K H I K G F W A I Y D I V E M N -G I N H D V L D F -V V ----D T -
uvig_167629_CDS_0007 Q D E K R E H F S P I S -A F -L -I K M F A V N E K Y Q D T Y Y N ---D E L V -A -S -L I -L -K N I I -F D L -(240)
D F+++ D
AcrVA2 -D --T ----D -D N -V Y -V P Q P F I L S -S -------G Q S V A E -V -L -D Y -G -A S L -F D D D T S
uvig_167629_CDS_0007 Y D -M S T S V V G A K R -I I L -C A -V -E -K A K K F Y K L N N F K E F D D -N Y T L ---F -D K -I ---D A (300)
+ + + C E +
AcrVA2 -N T L I K -G L -L P Y L -L W L C -V -A E P D -I T ---Y K G L P V S R E E L T R P K H S I N K -K T G A F --
uvig_167629_CDS_0007 --Q D -----------------------------N -------------------------- (360)
AcrVA2 V T P S E P F I Y Q I G E R L G S E V R R Y Q S I I D G E Q K R N R P H T K R P H I R R G H W H G Y W Q G T G Q A K E F
uvig_167629_CDS_0007 ----Y -P M Y L A L H -N -V (377)
+
AcrVA2 R V R W Q P A V F V N S G R V S S
uvig_167629_CDS_0007 5 AcrIC11 0.39 View Alignment uvig_167629_CDS_0007 M R K T I Q N F K P V -I E -A L S E -G N I D L I R N F F -V -G E K A F D D F I K E E A I N D M I S -G D -G V T Y (60)
M K ++ E ++ + F V + + + ++ +
AcrIC11 M N K --E -T Q I T A -S A V V G E D K R L E F L S K H F G V R F A R R G E A L V F A W L L R L A K V P I E W T R L Q
uvig_167629_CDS_0007 L I I N E V S K R E I V A Y Y T I S S S S I H T I D R Y D F E D -E D -V P Q D E K R E H F S P I S A F L I K M F A V -(120)
Y + + + S + ++ +
AcrIC11 Y Y T L -S ---N -S G F Y L A P R E L -R I S -E -----C -E L ----------S A D A V G I V A T M L T L
uvig_167629_CDS_0007 N ---E K Y Q D T Y Y -N D E ---L V A -S L I L -K N I I F D L Y D M S T S -V V G A -K -R I I L C A V E K A K (180)
A L + + + + +
AcrIC11 R Q L A H E S A A C V E A D --S T Y -P A A K L -A V T -A S V K F A ----Q Q ---Y H -H -L ----A A Y S V
uvig_167629_CDS_0007 K F Y K L N N F K E F D D N Y T L F D K I D A Q D N Y P M Y L A L H N -V (217)
K + ++ Y A
AcrIC11 K ------------------H ---A E S I N I Y R A ---I D
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;