3D Structure for uvig_163765_CDS_0004 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 88.45 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_163765_CDS_0004 1 AcrVA1 0.72 View Alignment uvig_163765_CDS_0004 M E E R Y E A K R R Y V E K I M R E N A E I E T L T E E Q H D A L E K L A S I R H K I H T S W E S M W N C E S S E Y F T (60)
M E K RY+ K M EN I+TLT+EQHDAL L RHK H++ +S + S
AcrVA1 M Y E A ---K E R Y A K K K M Q E N T K I D T L T D E Q H D A L A Q L C A F R H K F H S N K D S L F -L S E S A F S G
uvig_163765_CDS_0004 L W A Y -I D Y G I N E M L V E A A L P A I D F S H D S G D I P T D ---A -D Y -F D -L T E E E R E E Y G N D S W T (120)
+ N L E+ LP I++S D F E E
AcrVA1 E F S F E M Q S D E N S K L R E V G L P T I E W S F Y D N S H I P D D S F R E W F N F -A N Y S E L S E T I Q E Q G L E
uvig_163765_CDS_0004 -W R E E -------S -G A Y D E F A D F L A E V N N K I E N Y L M K V D E E H G T H Y A P T G F E R L K (175)
++ +Y E E+N+ IE YL ++DEEHGT Y PTGF RL+
AcrVA1 L D L D D D E T Y E L V Y D E L Y T E A M G E Y E E L N Q D I E K Y L R R I D E E H G T Q Y C P T G F A R L R
uvig_163765_CDS_0004 2 AcrIB2 0.57 View Alignment uvig_163765_CDS_0004 N /A (3)
N/A
AcrIB2 N /A
uvig_163765_CDS_0004 3 AcrIF2-IC2 0.54 View Alignment uvig_163765_CDS_0004 M E E R Y E A K R R Y V E K I M R E N A E I E T L T E E Q H D A -L E K L A S I R H K I H T S W E S M -W N -C E S S E (60)
M + E
AcrIF2-IC2 M A --T K -T A Q M I A Q ---Q H K -D ----------T ------------------V -A A ---C E
uvig_163765_CDS_0004 Y F T L W A Y I D Y -G I N E M L V E A A L P A I D F S H D S G D I P T D A D Y F D -L T E E E R E E Y G N D S W T W R (120)
+ A + + + T
AcrIF2-IC2 A --------A E -A I A I ---A K D -Q V W D G E G ------Y T -K Y T F -D -D N -S V L I Q S G T T Q Y
uvig_163765_CDS_0004 E E S G A Y -D E F A -D F L -A E V N -N -K I E -N Y -L M -K V D E E --H G T H Y A P T G F E R L K (174)
+ A + ++ + E
AcrIF2-IC2 ---A M D A -D D A D -S I K -G Y A D -W -L D D -E A -R S ----A E A S E I E R L L E S V E E -E
uvig_163765_CDS_0004 4 AcrIF4 0.53 View Alignment uvig_163765_CDS_0004 M E E R Y E -A K R R Y V E K I M R E N A E I E T L T E E Q H D A L E K L A S I R H K I H T S W E S M W N C E S S E Y F (60)
M Y +
AcrIF4 M M T I S K T D I D C Y --------------------------------L ---Q T ----------
uvig_163765_CDS_0004 T L W A Y I D Y G I N E M L V E A A L P -A -I D F -S H -D S G D I P T D A D Y F D L T E E E R E E Y G N D S W ---(120)
+ ID ID + G + E
AcrIF4 --Y V V I D P V -------S N G W Q W G I D -E N -G -V G G A L H H G R V E -M V E G ----E --N G -Y F G
uvig_163765_CDS_0004 T W R E E S G A Y D E F A D F L A E -V -N N -K I E N Y L M K V D E E -H G T -H Y A -P T G F E R L K (173)
E ++ +
AcrIF4 L R G A T H P T E K E A M A A A L G Y -L W -K C R Q D L -V A I A R -N -D -A I E -A -E K Y R A K A
uvig_163765_CDS_0004 5 AcrIF12 0.53 View Alignment uvig_163765_CDS_0004 M E E R Y E A K R R -Y -V E K I -M R E N A E I E T L T E E Q H D A L E -K L A S I R H K I H T S -W -E -S -M W N (60)
M K ++
AcrIF12 M A Y E ---K -T W -H -R D Y A ------------------A E ----S L K R ----A -E -T -S R -W
uvig_163765_CDS_0004 C -E ----S S E Y F T L W A Y I D Y G I N E M L V E A A L P A I D F -S H D S -G D I P T D A D Y -F D L T E E E R (120)
+ + A + + E+ E
AcrIF12 T Q D A N L E W T Q L A L E C A Q V V H L A R Q V G E E L G N E K ---I I G I A D -------T V L -S T I E A H S
uvig_163765_CDS_0004 E E Y G N D -S W T W -R E E S G A Y D E F A D F L A E V N N K -I E N -Y L M K V D E E H G T -H -Y A -P T -G F E (180)
+ A +E + +
AcrIF12 Q A T Y R R P C -Y K R -I T T A Q T H L L A V -------T L L E -R -F G S A R R V A N A V -W Q -L T D D E I D
uvig_163765_CDS_0004 R L -K (184)
+
AcrIF12 Q A K A
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;