3D Structure for uvig_145011_CDS_0009 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 87.64 ;
Download
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_145011_CDS_0009 1 AcrIIA7 0.70 View Alignment uvig_145011_CDS_0009 M N N G E H L D F S D A L G L L K Q G V K V C R L G W N G K G M F L Y Y V P E N R Y T P C ---T D ----A G ----(60)
M + F AL LK G V R GWNGKGMF+ PE P +
AcrIIA7 M -T -----F G Q A L E S L K R G H L V A R K G W N G K G M F I F M R P E D S -L P T N M I V N Q V K S L P E S F K
uvig_145011_CDS_0009 E -H -L -A G P ----D -G K V A Y G G Y I A M K T A Q G N V V P W -L A S Q T D V L A E D W C V Y L F E D E E A T (120)
A + ++ Y+ MK A G++V LASQTD LA
AcrIIA7 -R -W -V A N N H G D S E T D R I K F T A Y L C M K A A D G T I V N G W L A S Q T D M L A N -D -----------
uvig_145011_CDS_0009 V E -L Y D P L E T E D K (133)
AcrIIA7 W V I -------V -E
uvig_145011_CDS_0009 2 AcrIF9 0.53 View Alignment uvig_145011_CDS_0009 M N N G E H L D F S D A L G L L K Q G V K V C R -L G W N G K G M F L Y Y V P E N R Y T P C T D A G E H L A G P D -G K (60)
M + + + A +
AcrIF9 M K -A -A Y I I ---K E ----V Q N I -N S ---E R -E G T Q I E -A -T S L ---S Q A K R I A S K E -Q -C
uvig_145011_CDS_0009 V A Y G G Y I A M K T A Q G N V V P W L A S Q T D V L A E D W C V Y L F E D E E A T V E L Y -D P L E T E D K (115)
G T++ + ED
AcrIF9 -F H G T V M R I E T V N ----------------G L W L A Y K E D -G K --R -W V ----D -C Q
uvig_145011_CDS_0009 3 AcrVIA3 0.53 View Alignment uvig_145011_CDS_0009 M N N G E H L D F S -D -A -L -G L L K Q G V K V C R L G W N G K G M F L Y Y V P E N R Y T P C T D A G E H L -A -G (60)
M L+ G + L
AcrVIA3 M -F -----K -E -F -L -E K C L R Y G -N L Y I L E E -----------T G D R K K V K R ---I -S -K -
uvig_145011_CDS_0009 -P D G K V A Y G G Y I A M K T A -Q G N V V P W L A S Q T D V L A -E D W C V Y L F E D E E A T V E L Y D P L E T E D (120)
GKV ++ + + L + + + +
AcrVIA3 R -H G K V T E A S -V L L F D -S G T K R -T T -I -N E I Y L N S -Q G Y F I I R D Q K R --L K -L E ---K --
uvig_145011_CDS_0009 -K (122)
K
AcrVIA3 F K
uvig_145011_CDS_0009 4 AcrIIA4 0.52 View Alignment uvig_145011_CDS_0009 M N N G E H L D F S D A L G L L K Q -G V K V C R L G W N -G -K -G -M F L Y Y V P -E N R Y T P C T D A G E H L A G (60)
M N +D++ +K+ V G V + ++
AcrIIA4 M -N --I ---N D L I R E I K N K D Y T V K L S G T D S N S I T -Q L I -I R V N N D G N E Y V I S E -S ---E -
uvig_145011_CDS_0009 P D G K V A Y G G Y I A M -K T A Q G N V -V -P W L A S Q T D V L A E -D W C V Y L F E D E E A T V E L Y D P L -E T (120)
+ I + T+ L
AcrIIA4 --N E S I V E K F I S A F -K N --G W N -Q -E Y E D E E E F -Y N D -M --------Q -T I T L ---K S --
uvig_145011_CDS_0009 E D -K (124)
+
AcrIIA4 -E L N
uvig_145011_CDS_0009 5 AcrIIA12 0.52 View Alignment uvig_145011_CDS_0009 M N N G E H L D F S D A L G L L K Q G V K V C R L -G --W N G K G M F L Y Y V P E N R Y T P C T D -A -G E H L A G P (60)
M+ +D++ L+K N E + P
AcrIIA12 M S --K T M Y K N D V I E L I K ---N ----A -K T -N N E E L L F T S -V E R N T R ---E A -A T Q Y F R C P
uvig_145011_CDS_0009 D G K V -A Y G G Y I A M K -T -A -Q G N V V P W L A -S -Q T D -V L A E D W C V Y L F E D E E A T V E L Y D P L E (120)
+ G + ED +Y Y
AcrIIA12 E K -H V S D A G V -Y -Y G -E -D -F E ------F D G -F E I -F -E D D L I Y T R S --------Y -D K -
uvig_145011_CDS_0009 T E D -K (125)
+
AcrIIA12 E -E L N
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;