3D Structure for uvig_142801_CDS_0033 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 88.88 ;
Download
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_142801_CDS_0033 1 AcrIIA27 0.70 View Alignment uvig_142801_CDS_0033 M -K F K F E K -E L D Y I -V G -H L R Y G H I E G T I E A D S L E E A K K K L E E Y E K K D L L C E F G E V V V D D (60)
M F E + I +EA + EA KK+ E D
AcrIIA27 M K T F N I I V S E S A N L K E H S S E L V D N I I Y K V E A K N R R E A F K K A R E E Y S F S ---S K W K F N M R D
uvig_142801_CDS_0033 -Y E C E D F E K S S -T P --A R I I -E D E (84)
+ + + E
AcrIIA27 L T A I D N T H R R A W G R R Y -L R V E E -A
uvig_142801_CDS_0033 2 AcrIE2 0.63 View Alignment uvig_142801_CDS_0033 M K F K F E K E -L D Y -I V G H L R Y G H I E G T -I E -A -D -S L E E A K K K L E E Y E K K D L L C E F G E V V V (60)
M G AK + EF +V
AcrIE2 M N T Y L I D P R K N N D N S G E R -F ----T -V D -A -V -D I T A A A K S A A Q Q I L ----G E E F E G L V Y
uvig_142801_CDS_0033 ---D D Y E C E D ----F -E K ----S S --------T P A R I I E D E (101)
+ + P ++ E
AcrIE2 R E T G E S N G S G M F Q A -Y H -H L H G T -N R T E T T V G Y P F H V M E -L
uvig_142801_CDS_0033 3 AcrIIA33 0.62 View Alignment uvig_142801_CDS_0033 M K F K F E K E L D Y I V G H L R Y G H -I E G T I E A D -------------------------------(60)
M K T+EA+
AcrIIA33 M I K W T G K -S T ---D ---K -G W -I R T V E A E T Y Y K L L E T L V D K G Y I G D Y I D S D S Q L F H E L A Y
uvig_142801_CDS_0033 ---S L E ----------E -A K -K -K -L E -E Y E K K -D L L C E F G E V V V D D -Y E C E D F -E K S S T (120)
+ + D E + D T
AcrIIA33 V S P A V A D L E D R L N D E H -Q V -E -Q -A -L E -D L E N F D W N R -V F E K L T D -Q -Q F Q T A I A -G C T
uvig_142801_CDS_0033 P ----A R I I E -D E (133)
E E
AcrIIA33 -S Q A Y Y Q E F E V I E
uvig_142801_CDS_0033 4 AcrIC8 0.60 View Alignment uvig_142801_CDS_0033 M K F K F E K E L D Y I ---V -G -H L R -Y G -H I E -G T I E A D S L E E A K K K L E E Y E K K D L L C E -F G E (60)
M K + + G + + EA ++E+ + E
AcrIC8 M Y -A I R K -I Q F F Y G P -T -D K K S Y V G E E A G G R R E L F K T R A E A Q A R I E D -L E E G V Y Y L A H N E
uvig_142801_CDS_0033 V V V D D ---Y E C E D F -E K -S -S T P A R I I E D E (90)
D AR
AcrIC8 S G R P D Y K I V W V R G -E A -Q -F -E H A R W M R -G
uvig_142801_CDS_0033 5 AcrIIC5 0.58 View Alignment uvig_142801_CDS_0033 M K F K F E K E L D Y I V -G H L R Y G H I E G T I E A D -----------------S L E -E A K -K K L E E -(60)
M V G + K E
AcrIIC5 M N N S ---I K F -H V S Y -D --G T A R A --L F N T K E Q A E K Y C L V E E I N D E M N -G Y K -R K S W E -E
uvig_142801_CDS_0033 Y E -K K -D L L C E --------F G E V -V V -D D -Y E C E D F E K --------S S ------------(120)
+ + D
AcrIIC5 K -L R -E E N C A S V Q D W V E K N -Y T S S -Y S D -L F N I C ---E I E V S S A G Q L V K I D N T E V D D F V E
uvig_142801_CDS_0033 -----T ----------P -----A R I -I -E -D E (152)
T + E +
AcrIIC5 N C Y G F T L E D D L E E F N K -A K Q Y L Q K -F Y A E C E N
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;