3D Structure for uvig_142588_CDS_0020 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 94.85 ;
Download
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_142588_CDS_0020 1 AcrIE6 0.71 View Alignment uvig_142588_CDS_0020 M K E L K T M T E H Q L L -S L A Y C T L L E W I V H E E N I N E R A K K E ---I G R D -N C -I C Q N -R L K -M Y (60)
M L +
AcrIE6 M N N D T E V ----L -E -Q Q I K A F E L L A D E L K D R L P T -L E I L S P M Y T A V M -V T Y D -L I G -K Q L
uvig_142588_CDS_0020 N E Q L A E V -R E R I L E I E -H N ---N K E --S -K N (91)
AE E + E +
AcrIE6 A S R R A E -L I E I L E E Q -Y P G H A A D L S I K N L C P
uvig_142588_CDS_0020 2 AcrIE1 0.61 View Alignment uvig_142588_CDS_0020 M K -E L K T ---M --T E -------H ----Q ---L L S L A Y C T L L -E -W I V -H E E N I N E R A -K K (60)
M L + +LSL+ ++ + N ++
AcrIE1 M E K K L S D A Q V A L V A A W R K Y P D L R E S L E E A A S I L S L I V F Q A -E -T -L S D -Q A N E L A N Y I R R
uvig_142588_CDS_0020 E I G R D N C I C Q N ----R -L K M Y N E Q L A -E V -R -E -R I -L E I E H N N K E S -K N (110)
+ E E + + + +
AcrIE1 Q G L E E A E G A C R N I D I -M R A K W V E V C -G E -V -N -Q H -G I R V Y G D A I D R D V D
uvig_142588_CDS_0020 3 AcrIIC4 0.58 View Alignment uvig_142588_CDS_0020 M K -E ---L K T M T E ----------H -Q -L L S -L -A Y C T L L E W I V -H E E N I N E R A K K E I G R D (60)
MK T + +V + K
AcrIIC4 M K I T S S N F A T I A T S E N F A K L S V L P K -N H R -E -P I K G L -F K S A V E -Q F S S A R D F F K N E N Y S
uvig_142588_CDS_0020 N C I C Q N R L K -M Y -N -E -Q L A -E V R E R I L E I E H N N K E -S K N (100)
+ K ++ +++++ +
AcrIIC4 K E L A E K F N K E -A V -N -E -A V E -K L Q K A I D L A E K Q --G I Q F
uvig_142588_CDS_0020 4 AcrIF23 0.56 View Alignment uvig_142588_CDS_0020 M K E L K T ----M -------T -------------E ---------------------------(60)
M T +
AcrIF23 M T N F Q T W L D S -A D I P V Q Q N G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T F
uvig_142588_CDS_0020 -----------------------H Q -L L -S ----L A Y C T L L E W I V H E E N I N E R A K K E I -G (120)
C + E +
AcrIF23 G G R A L T G T A R Q K E W A E K I R A E K V Q -Q M -N -Q D Q A E M A C D P S G L L T A A K F W I E N R -N D S A -
uvig_142588_CDS_0020 R D N C I C Q N R L K M Y N E Q L A E V R -----E R I -L E -I E -H -N N K E S ---K --N (170)
+ K Q ++ ++ + I
AcrIF23 Q E I A G F V M Q Q K A L L A Q H R S A K A A G Q A D K -V A -K I -A -A E Y N A L T A R -W G F
uvig_142588_CDS_0020 5 AcrIC3 0.53 View Alignment uvig_142588_CDS_0020 M K -E L K T -M ---T -----E ----------H Q -L L S -L A Y C T L L E -W I V -H E E -N -I N E R -(60)
M + + + + L + R
AcrIC3 M S I Q V T S T N G R T V N L E I E L G S V V A S S G Q V K -F M A -D K T D R G L E S R F --L -V P E -A -G N R R
uvig_142588_CDS_0020 -----A K K E I G R D N C I C Q N -R L K -M Y N E Q L A E V R E R I L E I E H N N K E -S K N (110)
+++ N + + + E E + +
AcrIC3 I E V A L T G R D L E A A N A L F S -E L A -A -S V E A T N E M Y R E L D A E R A Q I N K A L E G
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;