3D Structure for uvig_140426_CDS_0017 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 91.03 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_140426_CDS_0017 1 AcrIE1 0.73 View Alignment uvig_140426_CDS_0017 M E F E K L Y M F N P F A I Q N A D S K Q -I A D T Y G R L Q N E I T E N A D T G F L I S -K N I E I Y A N M N Y L I G (60)
M K D +
AcrIE1 M -E K K -L S D A Q ----V ----A L --------V A A W R K Y P D L ----R E -----------S L E
uvig_140426_CDS_0017 E M I A -R L Q -Q -E Y D T L -K -T -D -I -S -I Q -E -N -K Q I Y M Q R K Q W Q E T Q K E K -P P A M S Y F E (120)
E + L Y
AcrIE1 E A A -S I L -S -L I V F -Q A -E -T -L -S -D Q -A -N -E L A N Y I R ----R Q G ----L --------
uvig_140426_CDS_0017 A M A K E F V K E D S K R L A E L G S R L F R F K K A Y E S I D S K Q N -A L K K K I E -A I R Y E -I (172)
+ + + + + N + AI +
AcrIE1 ---E --------E A E G A C R N I D I M R A K W V E V C G E V N Q H G I R V Y G D A I D R D V D
uvig_140426_CDS_0017 2 AcrIE6 0.66 View Alignment uvig_140426_CDS_0017 M E F E K L Y M F N P F A -I Q N A D S K Q I A D T -Y G R L Q N E -I T E N A D T G F L I S K N I E I Y A N M N Y L I (60)
M QI L E
AcrIE6 M N --N -D ----T E V -L E ---Q Q I K -A F E -L L A D E L K D R ----L ---P T ----L E I L ----
uvig_140426_CDS_0017 G E M I A R L Q Q E Y D T L K T D I -S I Q E N K Q I Y M Q R K -Q -W -Q E T Q K E K -P P A M S Y F E A M A K E F V (120)
M + YD + + + +
AcrIE6 S P M Y T A V M V T Y D L I G K Q L A -S R R A E L ---I -E I -L -E E -Q Y P G H A ---------------
uvig_140426_CDS_0017 K E D S K R L A E L G S R L F R F -K K A Y E S I D S K Q N A L K K K I E A I R Y E -I (164)
I+
AcrIE6 --------------A -D L ----------------S ---I K N L C P
uvig_140426_CDS_0017 3 AcrIC3 0.59 View Alignment uvig_140426_CDS_0017 M E F E K L Y M F N P F A -I Q N A D S K Q I A D T Y G -R -L -Q N -E -I T E N A D T G F L I S K N I E -I Y -A N (60)
M + N N + + +
AcrIC3 M S ------I Q V T S T --N G ----------R -T -V -N L -E --------I E L G S V V -A S -S G Q
uvig_140426_CDS_0017 M N Y -L I G E M I A -R L Q Q E Y D T L K T D I S -I Q E N K Q --I Y M Q R K Q -W Q E T -Q K E K P P A M S Y F E (120)
+
AcrIC3 V K -F -M A D ---K -T -----------D R G ---L -E S R F -----L V -P E A --G N -------R
uvig_140426_CDS_0017 A M A K E F V K E D S K R L -A -E L G S R L F R F K K A Y E S I D S K Q N A L K K K I E A -I R Y E I (172)
D + L S L A A + I
AcrIC3 R I E V A L T G R D L E A A N -A -L F S E L A A S V E A T N E M Y R E L D A E R A Q I N K A -L E -G
uvig_140426_CDS_0017 4 AcrIF23 0.58 View Alignment uvig_140426_CDS_0017 M -E F E K L Y -M -----------------F --N P F -A I ----------Q -N -A D S K Q I A D T Y (60)
M F P +D + +A T
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R -G I D A R A V A K T F
uvig_140426_CDS_0017 G -R L Q N E I T E N A D T G F L I S K N I E I Y -A N M N Y L I G E M I A R L Q Q E Y D T L K T D I -S -I Q -E N -(120)
G R+ +T +A ++ E A Q + + +
AcrIF23 G G R A ---L T G T A -------R Q K E W A E -K -------I R A E K V Q Q M N Q D Q A E M A -C D -P -S G
uvig_140426_CDS_0017 K Q I Y M Q R K Q W Q E T Q K E K P P A -M S Y F E A M A K -E -F -V K E D S K R L A E L G S R L F R F K K A Y E S I (180)
A + + +A S+
AcrIF23 L --------------L -T A A K -F ----W I -E -N -R -N D S A Q E I A G F V M Q Q K A L L A Q H R S A
uvig_140426_CDS_0017 D -----S K Q N A L K K K I E A I R Y -E -I (205)
K + A+
AcrIF23 K A A G Q A D K V A K I A A E Y N A L T A R W G F
uvig_140426_CDS_0017 5 AcrIIA11 0.57 View Alignment uvig_140426_CDS_0017 M E F E K L Y M ------F N P F A I Q N A D S K -Q -I A D T Y G -R -L -Q N E I T E N A D T G F L I S K N I E I (60)
M L F + Q A + + K I
AcrIIA11 M A D M T L R Q F C E R Y R K G D F -L A K D R -E T Q I E A ----G -W -Y -D W F C D D K A L A G R L A K I W G I
uvig_140426_CDS_0017 Y A N M -N Y L I G E M I A -R L Q ----Q E Y D T L K ------T D I -S -I Q E N K Q I Y M -Q -R -K Q --W (120)
+ I + L Q
AcrIIA11 L K G I T S D Y I L D N Y R V -W F K N N C P M V G P L Y D D V R F E P L -D -E E Q R D E L Y F G V -A I D D -K R R
uvig_140426_CDS_0017 Q E T ------Q --K ----E K ----P P A M S Y F E A M A K E F V -K -E D S K R L A E L G S R L F R F -K K (180)
+ + E +
AcrIIA11 E K K Y V I F T A R N D Y E N E C G -F N N V R E V R Q F I N G W E D E L K N -E ---E F Y K A R E K K R Q E -M E E
uvig_140426_CDS_0017 A Y E S I D S K Q N A L K K K I E A I R -Y -E I (205)
A + + + +
AcrIIA11 A N N K F A E I M Q R A D E I L W N L -K -E -D
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;