3D Structure for uvig_131547_CDS_0029 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 95.13 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_131547_CDS_0029 1 AcrIE6 0.75 View Alignment uvig_131547_CDS_0029 M T K I D A F K E T I N I D I A M K R G M M N R D V E S I R N C I D S --D P V A F A D Q I L S Y A E D L S R L K N E I (60)
M+ E + I + + + A + L + E+
AcrIE6 M N N ---D T E V L E Q Q I K A F E L L A D E L K D R L P T L E I L S P M Y T A V M V T Y D L I G K Q L A S R R A E L
uvig_131547_CDS_0029 I -N L K S T L S M L D A -I K V ---S E (82)
I L + A + +
AcrIE6 I E I L E E Q Y P G H A A D L S I K N L C P
uvig_131547_CDS_0029 2 AcrIE1 0.69 View Alignment uvig_131547_CDS_0029 M -T ---K I D A F K E -----T -------I -N -------I -D -I -A -M K R G -M M N R D V E S I R N (60)
M + + + + + N
AcrIE1 M E K K L S D A Q V A L -V A A W R K Y P D L R E S -L -E E A A S I L S L -I -V -F -Q A E T -L S D Q A N E L A N
uvig_131547_CDS_0029 C I D S D P V A F A D Q I L S Y A E D L S R L K N E I I N L K S T L ----S M L D A I -K V -S -E (111)
I ++ + + + + + + + +
AcrIE1 Y I R R Q ---G L E E A E G A C R N I D I M R A K W V E V C G E V N Q H G I R V Y G D A I D R D V D
uvig_131547_CDS_0029 3 AcrIIC4 0.64 View Alignment uvig_131547_CDS_0029 M T K I D A F K E -----T -------I N ----I D I A M K R G M M N -R D V E S I R N C I D S D P -V A F A D (60)
M + I S+R ++ +
AcrIIC4 M K I T S S N F A T I A T S E N F A K L S V L P K N H R E P I K G L F K S A V E -Q F S S A R D F F K N E -N -Y S K E
uvig_131547_CDS_0029 Q I L S Y A E D L -S -R L -K N E -I I N L K S T L S M L D A I K V -S E (98)
+ + + L + +
AcrIIC4 L A E K ---F N K -E -A V N E -A V E K L Q K A I D L -A E K Q G I Q F
uvig_131547_CDS_0029 4 AcrIF23 0.58 View Alignment uvig_131547_CDS_0029 M T K I D A F K E -------T I N ----------------------------------------I (60)
MT + + +
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T F G
uvig_131547_CDS_0029 ----------------D ----I A -M K ----R G ----M M N R D V -E -S I -R -N -C I D -S D P V (120)
+ + I
AcrIF23 G R A L T G T A R Q K E W A E K -I R A E K V Q Q -M N Q D Q A E M A C D P S G L -L -T A -A -K -F W I -E -N R N
uvig_131547_CDS_0029 A F A ----D Q I L S Y A E -D L S R L -K -N -E -I I ------N L -K -S -T -L -S -M -L -D A -I K V -(180)
A + L
AcrIF23 D S A Q E I A G -F V M Q Q K A -L L A Q H -R -S -A K -A A G Q A D K -V -A -K -I -A -A -E -Y -N A -L -T
uvig_131547_CDS_0029 --S -E (185)
AcrIF23 A R W G F
uvig_131547_CDS_0029 5 AcrIC3 0.58 View Alignment uvig_131547_CDS_0029 M T -K I D A F K E ----T ---I -N -------I D I A M K R G ----M M N -R ------D V -E S I R N -(60)
M+ + + R I
AcrIC3 M S I Q V T S T N G R T V N L E I E -L -G S V V A S S G Q V K F M A D K T D R G L E S R F L V P E A -G N R R I E V A
uvig_131547_CDS_0029 C I D S D P V A F A D Q I L S Y A E D L S R L K N E I I N L K S T L S M L D A I K -V S E (105)
D A A + L + +
AcrIC3 L T G R D L E A A N A L F S E L A A S V E A T N E M Y R E L D A E R A Q I N K A -L -E G
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;