3D Structure for uvig_131394_CDS_0004 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 96.00 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_131394_CDS_0004 1 AcrIIA27 0.72 View Alignment uvig_131394_CDS_0004 M R L F I V T V F -N K -----V -E --K -Y A D A Y L V R A N D K F G A I V A C K Y R L D E E T D E K --A V G -(60)
M+ F + V + E +Y V A + A + + K
AcrIIA27 M K T F N I I V S E S A N L K E H S S E L V -D -N I I Y K V E A K N R R E A F K K A R E E Y S F S S K W K F N M R D L
uvig_131394_CDS_0004 Y S I -------I D V --N E Y -H -D (82)
I
AcrIIA27 T A I D N T H R R A W G R R Y L R V E -E A
uvig_131394_CDS_0004 2 AcrIE2 0.66 View Alignment uvig_131394_CDS_0004 M R L F I V T V F N K V E K Y A D A Y L V R A N -D K F G A I V A C K Y R L D E E T ----D E -----K -A -V G Y (60)
M ++ + + V A A A L EE G
AcrIE2 M N T Y L I D P R K N N D N S G E R F T V D A V D I T A A A K S A A Q Q I L G E E F E G L V Y -R E T G E -S -N -G S
uvig_131394_CDS_0004 S -I -----------I --D V -N -E ----Y -H D (91)
AcrIE2 G M -F Q A Y H H L H G T N R T E T -T -V G Y P F H V M E L
uvig_131394_CDS_0004 3 AcrIC9 0.63 View Alignment uvig_131394_CDS_0004 M R ----L -F -I V T V F N K V E K Y A D -A Y L V R -A N D K F G A I V A C K Y R L D E E T D E K A V G -Y S -I (60)
M +T + L + + +
AcrIC9 M E T K M T S F -Y K I T -A Y --N -S Q A L Y F ---W -G T D A D V D R Y -V D W L N R D R E I N V Y A A E -A -
uvig_131394_CDS_0004 ---------------I D V -N -----E ---Y -H D (93)
+ +
AcrIC9 I P E A E W A Q Y E G R D D V L S -G E E C G W D D F M S -A E A
uvig_131394_CDS_0004 4 AcrIE8 0.57 View Alignment uvig_131394_CDS_0004 M R L F I V T V F N K V E K Y A D A Y L V R A N D K F G A I V A C K Y R L D E E T D E K A V -G -Y S -I -----I D (60)
M ++ + + + + + +
AcrIE8 M T T I T I N T -Y --D -P E A R F N M S G E E A K E F F A F V E E Q A K V S -G F D V Y Y D S C T Y -V D E E S E R
uvig_131394_CDS_0004 V --N -E -Y -H D (71)
AcrIE8 -F V E K -C F Q N Y
uvig_131394_CDS_0004 5 AcrIF19 0.54 View Alignment uvig_131394_CDS_0004 M R ----------L F I V T V -F N K V E K -Y -A D A Y L V R A N D K F G A I -V A C K --Y R L D E E ----(60)
M+ + + + D G+ A ++
AcrIF19 M K P L H T M N Y D N N Q M S L V Y E S Y D E Y G F E Y S V K L K I S V R D Y R G I D V S A F N A F P E W E D T L R M R
uvig_131394_CDS_0004 T -D --E --K -A V G ------Y S I -I -D V --N -E -Y --H D (98)
+ S Y
AcrIF19 -D R V M S V E -E I E N A M I S R Y K S -L F I A P P D -C -T Y E F D I
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;