3D Structure for uvig_129430_CDS_0002 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold with pLDDT = 92.50 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see: Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_129430_CDS_0002 1 AcrIE6 0.85 View Alignment uvig_129430_CDS_0002 M N V L E -K ---I V E E I E S M K N D A Y E T L K E E K R I H G ---A -S K T A E E L E S Y I Y G L T -R A I D V (60)
MN + E ++ + L + A T + + + +I++
AcrIE6 M N N D T E V L E Q Q I K A F E L L A D E L K D R L P T L E I L S P M Y T A V M V T Y D L I G K Q L A S R R A E L I E I
uvig_129430_CDS_0002 V E K Y A ----D K -E --N --A E (80)
+E
AcrIE6 L E E Q Y P G H A A D L S I K -N L C P
uvig_129430_CDS_0002 2 AcrIE1 0.84 View Alignment uvig_129430_CDS_0002 M -N ---V L E K I -V ------E -----------E -I -E S --------M -K -N -D -A -Y E -T L (60)
M + + V
AcrIE1 M E K K L S D A Q V A L V A A W R K Y P D L R E S L E E A A S -I -L S -L I V F Q A E T -L -S -D -Q -A N -E L -
uvig_129430_CDS_0002 K E E K R I H G A S K ---T -A E E -L E S Y I Y G L T R A I D V V E K Y A ----D K E -N --A -E (113)
R ++ + V +
AcrIE1 A N Y I R R Q -G L E E A E G A C R -N I D I M R A K W V E V C G E V N Q H G I R V Y G D A I D R D -V D
uvig_129430_CDS_0002 3 AcrIF15 0.84 View Alignment uvig_129430_CDS_0002 M N V L E K ---I V E E I E -S M K N D -A Y E T L K -E E K R -I H -G A ----S K -T A E E L E S Y I Y G L T R (60)
M+ + + + + + ++ +
AcrIF15 M T T I T I A Y E V S N D K V E -T I K T M V E S Q Q I H N V N -F N -G E E F T I E R G D F -T S I D K D E A E H V K
uvig_129430_CDS_0002 A I D V V E K Y A D K E N -A E (76)
++ + +
AcrIF15 L L N K I Q D I I H -G -Y -S
uvig_129430_CDS_0002 4 AcrIIC5 0.84 View Alignment uvig_129430_CDS_0002 M N -V L -E ---K I ------V -E -------E I -E -----S -----M K -N D A Y E T L -------(60)
MN + E L
AcrIIC5 M N N S I K F H V S Y D G T A R A L -F -N T K E Q A E K Y C L V E E I N D E M N G Y K -R K S W E E K L R E E N C A S
uvig_129430_CDS_0002 -K E E K R I H ---G ------A ---------------S K T A E E ---------L -E -S -Y -I Y - (120)
+ + + +++ +
AcrIIC5 V Q D W V E K N Y T S S Y S D L F N I C E I E V S S A G Q L V K I D N T E V D D F V E N C Y G F T -L -E -D -D L -E
uvig_129430_CDS_0002 G -L -T -R A I D V V E K Y A D K E N A E (142)
+A + K
AcrIIC5 -E -F -N K A K Q Y L Q K F Y A E -C E N
uvig_129430_CDS_0002 5 AcrIF2-IC2 0.83 View Alignment uvig_129430_CDS_0002 M -N -V L E K I -V E E I -E S M K N D ---------A -Y E ----T L K --E E -K R -I H -G -A ----S (60)
M + + + + +
AcrIF2-IC2 M A T K T A Q M -I A Q Q -H K D T V A A C E A A E A I A I -A K D Q V W D G -E G Y T K Y T -F D -D N S V L I Q S G
uvig_129430_CDS_0002 --------K ----T A E E L E S Y -I Y G L T R A I -D V V E K Y -A -D -K E N A E (107)
++ + A +E+ E
AcrIF2-IC2 T T Q Y A M D A -D D A D S I K G Y A D W L D D E A R S A E A S E I E R -L -L -E S V E E E
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;