3D Structure for uvig_129430_CDS_0002 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 92.50 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_129430_CDS_0002 1 AcrIE6 0.69 View Alignment uvig_129430_CDS_0002 M N V L E -K ---I V E E I E S M K N D A Y E T L K E E K R I H G ---A -S K T A E E L E S Y I Y G L T -R A I D V (60)
MN + E ++ + L + A T + + + +I++
AcrIE6 M N N D T E V L E Q Q I K A F E L L A D E L K D R L P T L E I L S P M Y T A V M V T Y D L I G K Q L A S R R A E L I E I
uvig_129430_CDS_0002 V E K Y A ----D K -E --N --A E (80)
+E
AcrIE6 L E E Q Y P G H A A D L S I K -N L C P
uvig_129430_CDS_0002 2 AcrIE1 0.65 View Alignment uvig_129430_CDS_0002 M -N ---V L E K I -V ------E -----------E -I -E S --------M -K -N -D -A -Y E -T L (60)
M + + V
AcrIE1 M E K K L S D A Q V A L V A A W R K Y P D L R E S L E E A A S -I -L S -L I V F Q A E T -L -S -D -Q -A N -E L -
uvig_129430_CDS_0002 K E E K R I H G A S K ---T -A E E -L E S Y I Y G L T R A I D V V E K Y A ----D K E -N --A -E (113)
R ++ + V +
AcrIE1 A N Y I R R Q -G L E E A E G A C R -N I D I M R A K W V E V C G E V N Q H G I R V Y G D A I D R D -V D
uvig_129430_CDS_0002 3 AcrIIC4 0.60 View Alignment uvig_129430_CDS_0002 M N -V L E ---K -I V E --------------------E -I -E -S -M K N -D A Y E -T L -K E E K R I (60)
M I+ + K
AcrIIC4 M K I T S S N F A -T I A -T S E N F A K L S V L P K N H R E P I K G L -F -K -S A -V E Q F S -S -A R D F F K N E
uvig_129430_CDS_0002 H -G -A S K T A E E L E S Y I Y G L T R A I D V V E K Y A D K E N -A E (97)
+ + + + A+K
AcrIIC4 -N Y S K E L A E K F N K E A V N E A V E K L Q K A I D L A E K Q G I Q F
uvig_129430_CDS_0002 4 AcrIF25 0.55 View Alignment uvig_129430_CDS_0002 M N ----V L ---------E -K I -V -E ----------------------E I E S -------M K (60)
M
AcrIF25 M D N D D K K P D A L I H L R V P -A E -V -K G R W V K E S R L E G M K L T D W I T G R V E A K A L S I A E V L E E A
uvig_129430_CDS_0002 N D A Y E T L K E E K R I H ------------------------------------------G ---(120)
+L +
AcrIF25 A A M A R S L E D S P I F -Y R N K L C A D G I V T I Q Q Q A A R F S A A T D D A T R L D A A L W A R E G Y Q L L S S G
uvig_129430_CDS_0002 ---------------A -S K T A E E L E S Y I Y G L T R A I D V V E K Y A D -K E -N -A E (171)
TA G I+ +
AcrIF25 L P D S Y S G A V P N E G R T -G W V T A S Q M A R L F G G E A L W I E R C Q Q E L G G A G K E D G R
uvig_129430_CDS_0002 5 AcrIC3 0.54 View Alignment uvig_129430_CDS_0002 M N -V L E -K I V E -------------E I -E -S -------M K N D -A Y E -T L K E E -K R -I H ---(60)
M+ + +
AcrIC3 M S I Q V T S T N G R T V N L E I E L G S V V A S -S -G -Q V K F M A D K T D R G L E -S -R F L V P E -A -G N R R
uvig_129430_CDS_0002 -G ---A -----------S K T -A E E L -E S Y -I -Y -G -L T -R -A I D -V V -E K -Y A D K E -N A E (120)
A E +D + K
AcrIC3 I E V A L -T G R D L E A A N A L F S E L A A -S V E -A T -N -E -M -Y R -E -L D A -E R -A Q -I N K -A L E G
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;