3D Structure for uvig_127854_CDS_0080 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 86.67 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_127854_CDS_0080 1 AcrIIA21 0.70 View Alignment uvig_127854_CDS_0080 M K -N -L ---S -------------K A T S F K V Y M Y M L G N ----V D -------N -Y R F A L S T Q (60)
M A VY ++
AcrIIA21 M D Y D N E N Y L I P K I L L Q D D F Y S S L S A K D I L V Y A V L K D R Q I E A L E K G W I D T D G S I Y L N F K L I
uvig_127854_CDS_0080 D I A D V C G M S K D T A K S A V N D L I E K G Y L V L R E K H -S Y D F Y E R P I D D S I P V E E E K K K F K V K G T (120)
++A S+ T + + L E + Y
AcrIIA21 E L A K M F S C S R T T M I D V M Q R L E E V N L I E R E R V D V F Y G Y S L ---------------P -----
uvig_127854_CDS_0080 V D E Y I E L T Y Q E L I N R V G S A E K A K I -L W D R H (150)
Y
AcrIIA21 ---Y K ----------T ---Y ----I -N -E V
uvig_127854_CDS_0080 2 AcrIA3 0.44 View Alignment uvig_127854_CDS_0080 M K -N L S K A T S F K V Y -M Y M L G N V D N Y R F A L S T Q D I A D V C G M S K D T A K S A V N D L I E K G Y L V L (60)
M + + K +++ E +
AcrIA3 M S F Y I M ---Y ----I -K V K E M S -E Q K Q ----I ---S ---L R -S K Q K E L L Q R F F E I A E --V
uvig_127854_CDS_0080 R -E -K H S Y D F Y E R P I D D S --------I P V ---------E ---E -E K K K F K V ---K -G T V D (120)
D KV
AcrIA3 D E -N G D L C I P L Y D S S G D L T L F K Q D S R K Y -Q M Y A Y F R I L R L I K -K Q I F F I K V K K V -K -R D K
uvig_127854_CDS_0080 E Y I E L T Y Q E L I N R V G S A E K -A -K -I -L -W D R H (152)
+ + +I +
AcrIA3 K F L C M H S N -V I D Q ------V -K -S -V -L -E -S
uvig_127854_CDS_0080 3 AcrIE5 0.43 View Alignment uvig_127854_CDS_0080 M K N L S K A T S F K V Y -M -Y M L G N V D N Y R F A L S T Q D I A D V C G M S K D T A K S A V N D L I E K G Y L V L (60)
M N + I+D G +D A + +L +
AcrIE5 M S N ----D ----R N -G -------------I I N Q I I D Y T G T D R D H A E R I Y E E L R A D D R I Y F
uvig_127854_CDS_0080 R E K H S Y D F Y E R P I D D S I P V E E E K K K F K V K G T V D E Y I E L T -Y Q E L I N R V -G -S -A E -K -A K (120)
++
AcrIE5 D --D ------S V G -----L D -R Q -G L L -I R E --------D --------V -D -L M -A -V -A
uvig_127854_CDS_0080 I L W D R -H (127)
+
AcrIE5 A E ---I E
uvig_127854_CDS_0080 4 AcrIF16 0.43 View Alignment uvig_127854_CDS_0080 M K N L S K A -T S F K V -Y M Y M L G N V D N Y R F A L S T Q D I A D V C G M S K D T A K S A V N D L I E ---K --(60)
M K + + L + + + T+ + +
AcrIF16 M S L S D K K E -Q K E A Y L D A L R -I --A ---P L D R G V L K R I H A V N D N T L D K W L Y V A D R Y P T F R A
uvig_127854_CDS_0080 -G Y L V ---L -----R E --K H S Y D F Y E R P ----I ----D D S ----I -P -V E E E K K K -F K V K (120)
L K R + + V + K
AcrIF16 C W E L W M F Q R K R R V L I -S R K -L H V L I N R S T N R T -I E A F E K T Y P P E E R -V V G K S Y R D L V T E K
uvig_127854_CDS_0080 G T -V D E -----Y I E -------------L -----T Y -Q -E L I N R V ----------G -S -A E (180)
G
AcrIF16 G E R S A N M Y I I N G E -V V G A K D A S I L L G Y -S S Y N T L -Y -A K M K R L G I Q P G D D I S H L K P -E -K
uvig_127854_CDS_0080 K A K I L W D R H (189)
+ +
AcrIF16 R G -R K K E C S
uvig_127854_CDS_0080 5 AcrIIA9 0.42 View Alignment uvig_127854_CDS_0080 M K --N L S K A T S F K V -Y -M Y M L G N V D N Y -R F -A L -S T Q D I A -D V C G M S K D T A K S A V N D L I E (60)
MK Y G + + F + D + ++N +
AcrIIA9 M K G T E ---H F K Q T -I -K E Y L D G R A Q T D E L F A V -S Y A ----K -E N K N L D D C I T F I L N Q V K A
uvig_127854_CDS_0080 K G Y L V L R -E --K H S -Y D F Y E R P -I D D S -I P V -E E E --K K K F K V K -----------G -T -V (120)
G + Y+ ID KV +
AcrIIA9 S G C C G M T D D E V W S L A I H Y Y D E D N I D V G N P I S C G V V V N ---H K V E L T E E E K A Q A R K -E -A L
uvig_127854_CDS_0080 D E -Y I E L ---T -Y Q E L -I N R -V ----G ---S A E K A K I L W D R H (162)
Y E Q S L+D
AcrIIA9 K -A Y Q E E E M R K I Q Q R -H S K -P -K P T A K A A Q S N Q T E L S L F D -F
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;