3D Structure for uvig_127530_CDS_0064 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 96.32 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_127530_CDS_0064 1 AcrIB1 0.83 View Alignment uvig_127530_CDS_0064 V S N T T I E I F S -G ---E K D -Y -D -L N G F D ---C --G E E S L N A F L A N H L K R Q H E G K I L R A Y V (60)
+ ++ L F + +FL ++ + I YV
AcrIB1 M E S K N L R K L L N E Y E E I D I N -E -M L K N F R S I K N S G T K N D I E I F L H E K A I K F E K S S I S S T Y V
uvig_127530_CDS_0064 L C T Q E E R P K V L G Y Y T L S G -S C F E K -E ---S -L P S R S K Q K K V ----P -----Y R N V P S V T L (120)
+ + E +LGY T+ S E S++ QKK+ S L
AcrIB1 V F S -E -D N E I L G Y F T I A N R S L V I P K E N F G -I -L S K T Q Q K K L G N S A A I L K N G D L M T S S F L L
uvig_127530_CDS_0064 G R L A L D K S L -Q -G Q G F G S M L V T H A M R V V Y N A S L A V G I H G L F V E A -L N D K A K A F Y K S L G F I (180)
G L S G L+T A + + ++ ++ +++E K+ FY + GF
AcrIB1 G Q L G K N Y S D D I E N L I T G R E L L T F A Y D L F L K I K E L I N V K Y I W L E C Q N E P K L I S F Y Q N F G F K
uvig_127530_CDS_0064 Q L V G N ---N E R S L F Y P T K S I E K L F -E E (207)
L K
AcrIB1 M L E S L T S E E G L ------K V M I M E -L -K
uvig_127530_CDS_0064 2 AcrVA5 0.55 View Alignment uvig_127530_CDS_0064 V S N T T I E I F S G E K D Y D L N G F -D C G E E S L N A F L A N H L K R Q H E G K I L R A Y V L C T Q E E R P K V L (60)
+ +
AcrVA5 M -K I E L --S G ----G Y I C Y S I -----------E ---------------------------
uvig_127530_CDS_0064 G Y Y T L S G S C F E K E S L P S R S K Q K K V P Y R N V P S V T L G R L A L D K S L Q G Q G F G S M L V T H A M R V V (120)
VT+ + + + QG GS L+ + V+
AcrVA5 --E --------------------------D E V T I D M V E V T -T -K R Q G I G S Q L I D M V K D V A
uvig_127530_CDS_0064 Y N A S L A V G I H G L F V E A ---L ----N D K A K A F Y K S L G F I Q L V G N N E R S L F Y P T K S I E K L F E (180)
G + + A ++ + FY S F + + +
AcrVA5 R E -V ---G -L P I G L Y A Y P Q D D S I S Q E D L I E F Y F S N D F E Y D P D D V D -G -----R L -M R --W
uvig_127530_CDS_0064 E (181)
AcrVA5 S
uvig_127530_CDS_0064 3 AcrIC11 0.40 View Alignment uvig_127530_CDS_0064 V S -N --T T I E I F S G E K D Y D L N G F D C G -E E S L N A F L A N H L K R Q H E G K I L R A Y V L C T -Q --E (60)
+ T+ + E L+ + R E + L
AcrIC11 M N K E T Q I T A S A V V -----G E D K ----R L E F L S K H F G V R F A R R G E A L -V F -A W L L R L A K V P
uvig_127530_CDS_0064 E R P K V L G Y Y T L S -G S C -F E K E S L P S R S K Q K K V P Y R N V P S V T L G R L A L D K S L Q G Q G F G S M L (120)
L YYTLS + + +
AcrIC11 I E W T R L Q Y Y T L S N S G F Y L -A -P ----------R ----E -L R I S E C E -L --------S A D A
uvig_127530_CDS_0064 V T H A M R -V -V Y N A S L A V G I H G L F V E -A -------L -------------N D K A K A F Y K S L G (180)
V ++ + + K Y+ L
AcrIC11 V G I -V A T -M -L T L R Q -L A -----H -E -S A A C V E A -D S T Y P A A K L A V T A S V K F A Q Q Y H H L A
uvig_127530_CDS_0064 F I Q L V G N N E R S L F Y P T K S I E K L F E E (205)
++ + + +I ++ +
AcrIC11 A Y S V -K ---H --A -E S I N I Y R A I -D
uvig_127530_CDS_0064 4 AcrVIA1_Lse 0.38 View Alignment uvig_127530_CDS_0064 V S -N -T T I E I F S G E K D -Y -D L N G F D C G E E S L N A F L A N H L K R Q H E G K I L R A Y V L C T Q E E R P (60)
+ + L E + L++ LK+ + E
AcrVIA1_Lse M I Y Y I K D L K V ---K G K I F E N L M ----N K E -A V E G L I T F L K K A ----E F E -I -Y -S R E N Y S
uvig_127530_CDS_0064 K V L G Y Y T L ----S G -S C F E K E S L P S R S K Q K K V P Y R N -V P S V T L G R L A L D K S L Q -G Q G F G S (120)
K + F N L ++
AcrVIA1_Lse K Y N K W F E M W K S P T S S L V F W --------------K -N Y S F R C H L L F V I E K -D -G E C L ---G
uvig_127530_CDS_0064 M L V T H A M R V V Y N A S L A V G I H G L F V E A L -------N D ---------K A K A F Y K S -L -G F I Q (180)
V ++ + + F+ + +
AcrVIA1_Lse I ----P A S V F E S V L Q I Y L A D -P F A P D T K E L F V E V C -N L Y E C L A D V T V V E H F E A E E S A W H K
uvig_127530_CDS_0064 L V G N ----------------N ---------------E --------R S L F Y P T K S I -----(240)
L + +K I
AcrVIA1_Lse L T H -N E T E V S K R V Y S K D D D E L L K Y I P E F L D T I A T N K K S Q K Y N Q I Q G K I Q E I N K E I A T L Y E
uvig_127530_CDS_0064 ---------------------E ----K L -F --E E (274)
E +
AcrVIA1_Lse S S E D Y I F T E Y V S N L Y R E S A K L E Q H S K Q I L K E E L N
uvig_127530_CDS_0064 5 AcrIIA21 0.37 View Alignment uvig_127530_CDS_0064 V S N -T T I E I F S G E K D Y D L N G F D C G E E S L N A F L A N H L K R Q H E G K I L R A Y V L C T Q E E R P K V L (60)
+ +
AcrIIA21 M D Y D N E N -------------Y --------L ------------------------------
uvig_127530_CDS_0064 G Y Y T L S G S C F E K E S L P S R S K Q K K V P Y R N V P S V -T L G R L A L D K -S L Q G Q G F G S M L V T H A M R (120)
+P L + + +
AcrIIA21 ----------------------------I P K -I -L L Q D D F Y S S --L -S A K D I L V Y A V L K D
uvig_127530_CDS_0064 V V Y N A S L A V G I -H ----G L F V E A ----------L -N D ---K A K A F Y K S L G F I Q L V G N N E R (180)
A L G + + + I
AcrIIA21 R Q I E A -L E K G W I D T D G S I Y -L N F K L I E L A K M F S C S R T T M I D V M Q R L E E V N L I E R E R V D V F
uvig_127530_CDS_0064 S L F -Y P T -K S I E K L F E E (197)
K+ E
AcrIIA21 Y G Y S L -P Y K T Y -I N -E V
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;